RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PCSK1NQ9UHG2 260 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 JRKLQ9Y4A0 524 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 CAPN6Q9Y6Q1 641 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 LAMA3Q16787 3333 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 ANAPC1Q9H1A4 1944 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 CTAGE9A4FU28 777 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 USP27XA6NNY8 438 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 LEFTY2O00292 366 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 MBTPS2O43462 519 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 IGLV3-25P01717 112 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 MIPP30301 263 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 CORO1AP31146 461 aaKnown RBP11.36□□□□□ -0.59
VARS2-210ENST00000490699 CHKAP35790 457 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 ARL4AP40617 200 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 PGFP49763 221 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 HDAC4P56524 1084 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 LEXMQ3ZCV2 418 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 ZC3H12AQ5D1E8 599 aaKnown RBP11.36□□□□□ -0.59
VARS2-210ENST00000490699 STXBP5Q5T5C0 1151 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 ERMARDQ5T6L9 678 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 TRNP1Q6NT89 227 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 CCDC50Q8IVM0 306 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 ARID3BQ8IVW6 561 aaPredicted RBP11.36□□□□□ -0.59
VARS2-210ENST00000490699 KIAA1958Q8N8K9 716 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 KCTD6Q8NC69 237 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 SH3RF2Q8TEC5 729 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 TEKT4Q8WW24 435 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 HSPH1Q92598 858 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 RBM41Q96IZ5 413 aaKnown RBP11.36□□□□□ -0.59
VARS2-210ENST00000490699 HAPLN3Q96S86 360 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 CYP2S1Q96SQ9 504 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 EPAS1Q99814 870 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
VARS2-210ENST00000490699 RNF38Q9H0F5 515 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 OBP2AQ9NY56 170 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 STIM2Q9P246 746 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 THEGQ9P2T0 379 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 AP4E1Q9UPM8 1137 aa11.36□□□□□ -0.59
VARS2-210ENST00000490699 NUP210Q8TEM1 1887 aaPredicted RBP11.36□□□□□ -0.59
VARS2-210ENST00000490699 HELZP42694 1942 aaKnown RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 A0A0U1RQJ8 604 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 E2F8A0AVK6 867 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 KCNU1A8MYU2 1149 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 F5H5T6 163 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 H3BRJ5 948 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 DAPK3O43293 454 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 MOSPD3O75425 235 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 STC2O76061 302 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 FTCDO95954 541 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 KRT1P04264 644 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 CYBBP04839 570 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 CASQ1P31415 396 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 HTR7P34969 479 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 ADRA1BP35368 520 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 IFNAR2P48551 515 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 RWDD2BP57060 319 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 ZNF252P-AS1Q0IIN9 211 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 PDK2Q15119 407 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 RABGAP1LQ5R372 815 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 SEL1L2Q5TEA6 688 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 PTCRAQ6ISU1 281 aaPredicted RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 CHSY1Q86X52 802 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 DENND1CQ8IV53 801 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 LRRC57Q8N9N7 239 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 BPIFB1Q8TDL5 484 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 ATRIPQ8WXE1 791 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 SUSD6Q92537 303 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 USP13Q92995 863 aaPredicted RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 AZIN2Q96A70 460 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 OTUB2Q96DC9 234 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 FCRL2Q96LA5 508 aaPredicted RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 C16orf45Q96MC5 204 aaPredicted RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 ASB16Q96NS5 453 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 PHF7Q9BWX1 381 aaPredicted RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 MAK16Q9BXY0 300 aaKnown RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 DHX35Q9H5Z1 703 aaKnown RBP11.35□□□□□ -0.59
VARS2-210ENST00000490699 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.35□□□□□ -0.59
VARS2-210ENST00000490699 SALL4Q9UJQ4 1053 aa11.35□□□□□ -0.59
VARS2-210ENST00000490699 LRRD1A4D1F6 860 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 ACSL4O60488 711 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 PAGE1O75459 146 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 ZRANB2O95218 330 aaKnown RBP eCLIP11.34□□□□□ -0.59
VARS2-210ENST00000490699 IGLV3-27P01718 113 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 LAMP2P13473 410 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 TCF3P15923 654 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 TFE3P19532 575 aaPredicted RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 CTNNA2P26232 953 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 CTNNA1P35221 906 aaKnown RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 DNA2P51530 1060 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 CDH6P55285 790 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 TPI1P60174 286 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 PITX1P78337 314 aaPredicted RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 SCAPQ12770 1279 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 SMTNL2Q2TAL5 461 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 PPP6R3Q5H9R7 873 aaPredicted RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 FAM78AQ5JUQ0 283 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 DNTTIP2Q5QJE6 756 aaKnown RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 SH3PXD2AQ5TCZ1 1133 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 TTC39BQ5VTQ0 682 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms