RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 CDH7Q9ULB5 785 aa13.74□□□□□ -0.21
SNX12-205ENST00000490561 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
SNX12-205ENST00000490561 SH3BP1Q9Y3L3 701 aa13.74□□□□□ -0.21
SNX12-205ENST00000490561 TRANK1O15050 2925 aa13.74□□□□□ -0.21
SNX12-205ENST00000490561 OBSL1O75147 1896 aa13.74□□□□□ -0.21
SNX12-205ENST00000490561 LAMA3Q16787 3333 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 DDX3YO15523 660 aaKnown RBP13.73□□□□□ -0.21
SNX12-205ENST00000490561 STC2O76061 302 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNX12-205ENST00000490561 KRT1P04264 644 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 RARAP10276 462 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 IL1R2P27930 398 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 GJC1P36383 396 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 PEX5P50542 639 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 ATXN1P54253 815 aaKnown RBP13.73□□□□□ -0.21
SNX12-205ENST00000490561 KRT81Q14533 505 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 DPYSL2Q16555 572 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 PUS10Q3MIT2 529 aaKnown RBP13.73□□□□□ -0.21
SNX12-205ENST00000490561 SEL1L2Q5TEA6 688 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
SNX12-205ENST00000490561 NPAS3Q8IXF0 933 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 CELF5Q8N6W0 485 aaKnown RBP13.73□□□□□ -0.21
SNX12-205ENST00000490561 CCDC185Q8N715 623 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 KCTD6Q8NC69 237 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 FAM71BQ8TC56 605 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 SUSD6Q92537 303 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 HSPH1Q92598 858 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 FGF13Q92913 245 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 SMARCD2Q92925 531 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 HLA-CQ95604 372 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 ZFRQ96KR1 1074 aaKnown RBP13.73□□□□□ -0.21
SNX12-205ENST00000490561 SLC22A12Q96S37 553 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 PEBP4Q96S96 227 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 CYP2S1Q96SQ9 504 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 EPAS1Q99814 870 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 TRPV4Q9HBA0 871 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNX12-205ENST00000490561 SNX12Q9UMY4 172 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 FAM50BQ9Y247 325 aa13.73□□□□□ -0.21
SNX12-205ENST00000490561 PRRC2BQ5JSZ5 2229 aaKnown RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 ANAPC1Q9H1A4 1944 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 E2F8A0AVK6 867 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 H3BRJ5 948 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 LEFTY2O00292 366 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 KCNK3O14649 394 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 ENC1O14682 589 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 PAGE1O75459 146 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 ATP1A1P05023 1023 aaKnown RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 HMBSP08397 361 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 TCF4P15884 667 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 CORO1AP31146 461 aaKnown RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 L1CAMP32004 1257 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 PTPN7P35236 360 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 ARL4AP40617 200 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 CDH6P55285 790 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 USP4Q13107 963 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 CBX2Q14781 532 aaPredicted RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 PPP2R5EQ16537 467 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 STXBP5Q5T5C0 1151 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 DAB2IPQ5VWQ8 1189 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 LRRC31Q6UY01 552 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 CYP4V2Q6ZWL3 525 aaPredicted RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 HTR3DQ70Z44 454 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 OTOP3Q7RTS5 596 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 CPNE8Q86YQ8 564 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 ZSCAN18Q8TBC5 510 aaPredicted RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 SH3RF2Q8TEC5 729 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 ING5Q8WYH8 240 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 KRT35Q92764 455 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 OTUB2Q96DC9 234 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 ZNF670Q9BS34 389 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 DHX35Q9H5Z1 703 aaKnown RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 DONSONQ9NYP3 566 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 TBC1D14Q9P2M4 693 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 STOML2Q9UJZ1 356 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 PACSIN2Q9UNF0 486 aaPredicted RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 EFR3BQ9Y2G0 817 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
SNX12-205ENST00000490561 SAR1BQ9Y6B6 198 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 DENND4CQ5VZ89 1909 aa13.72□□□□□ -0.21
SNX12-205ENST00000490561 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 ACSL4O60488 711 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 MOCS2O96007 188 aaPredicted RBP13.71□□□□□ -0.21
SNX12-205ENST00000490561 IRF1P10914 325 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 KCNA5P22460 613 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 KDELR1P24390 212 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 GBP2P32456 591 aaPredicted RBP13.71□□□□□ -0.21
SNX12-205ENST00000490561 HCAR3P49019 387 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 KCNQ1P51787 676 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
SNX12-205ENST00000490561 SMTNL2Q2TAL5 461 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 RAB6CQ53S08 254 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 KCNT1Q5JUK3 1230 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 CCDC50Q8IVM0 306 aa13.71□□□□□ -0.21
SNX12-205ENST00000490561 ARID3BQ8IVW6 561 aaPredicted RBP13.71□□□□□ -0.21
SNX12-205ENST00000490561 USP13Q92995 863 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms