RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ANKS1AQ92625 1134 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 STAMQ92783 540 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PTPRN2Q92932 1015 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MAGOHBQ96A72 148 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 DTNBP1Q96EV8 351 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 BICD1Q96G01 975 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 IFT74Q96LB3 600 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TRAPPC9Q96Q05 1148 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TMEM237Q96Q45 408 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 DHRS4Q9BTZ2 278 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC28BQ9BUN5 200 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CD244Q9BZW8 370 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 NSRP1Q9H0G5 558 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 RAB17Q9H0T7 212 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TMX4Q9H1E5 349 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 GANQ9H2C0 597 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 LRMDAQ9H2I8 198 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PABPC3Q9H361 631 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 KANSL2Q9H9L4 492 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 KIF9Q9HAQ2 790 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TRIM39Q9HCM9 518 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 NGRNQ9NPE2 291 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 RIC8AQ9NPQ8 531 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 ZDHHC18Q9NUE0 388 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PANK4Q9NVE7 773 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 GPRC5DQ9NZD1 345 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 BTBD7Q9P203 1132 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 SUCLA2Q9P2R7 463 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 BAIAP2L1Q9UHR4 511 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 NOC2LQ9Y3T9 749 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 USP15Q9Y4E8 981 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CD2APQ9Y5K6 639 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 ALPK3Q96L96 1907 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TRIP12Q14669 1992 aaPredicted RBP3.65□□□□□ -1.82
CRNKL1-203ENST00000490258 A0A087X0T9 212 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 FRMD3A2A2Y4 597 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 FZD9O00144 591 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 TRAFD1O14545 582 aaPredicted RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC26A4O43511 780 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 CTNND1O60716 968 aaKnown RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 DIAPH2O60879 1101 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 TCEA3O75764 348 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 SUN1O94901 812 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 EYA4O95677 639 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 GNA14O95837 355 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 FTCDO95954 541 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 C4BPAP04003 597 aaKnown RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 RPSAP08865 295 aaKnown RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 VIL1P09327 827 aaKnown RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM228BP0C875 321 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 ALAS1P13196 640 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 CHN1P15882 459 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 ACADSP16219 412 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 ATP6V1C1P21283 382 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 MCM7P33993 719 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 FLT3P36888 993 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 CTCFP49711 727 aaPredicted RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 LACTBP83111 547 aaPredicted RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 DHX34Q14147 1143 aaKnown RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 HLTFQ14527 1009 aaKnown RBP eCLIP3.65□□□□□ -1.834e-9■■■□□ 15
CRNKL1-203ENST00000490258 CNGA2Q16280 664 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 TBC1D25Q3MII6 688 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 USH1GQ495M9 461 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 TMEM119Q4V9L6 283 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM83BQ5T0W9 1011 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 C12orf60Q5U649 245 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 STRIP1Q5VSL9 837 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 SFMBT2Q5VUG0 894 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 DUPD1Q68J44 220 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 ANO7Q6IWH7 933 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 CCDC174Q6PII3 467 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 GLB1LQ6UWU2 654 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 RGS9BPQ6ZS82 235 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 C16orf86Q6ZW13 317 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 UNC13DQ70J99 1090 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 RRAGAQ7L523 313 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 CPLX4Q7Z7G2 160 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 ERICH1Q86X53 443 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 KLHL7Q8IXQ5 586 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 LRRC34Q8IZ02 419 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 METTL13Q8N6R0 699 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 NUDT10Q8NFP7 164 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 DNERQ8NFT8 737 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 NCSTNQ92542 709 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 TAF4BQ92750 862 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 AZIN2Q96A70 460 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 COA7Q96BR5 231 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM136AQ96C01 138 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 TBC1D31Q96DN5 1066 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 CDCA5Q96FF9 252 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 THOC1Q96FV9 657 aaKnown RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 NUDT11Q96G61 164 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 HES6Q96HZ4 224 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 ZBED3Q96IU2 234 aaPredicted RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 PSMB7Q99436 277 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 P2RX7Q99572 595 aaKnown RBP3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 KCNJ15Q99712 375 aa3.65□□□□□ -1.83
CRNKL1-203ENST00000490258 MMTAG2Q9BU76 263 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms