RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SSU72Q9NP77 194 aaKnown RBP3.21□□□□□ -1.9
UBXN4-208ENST00000490163 CACNG4Q9UBN1 327 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 HDAC6Q9UBN7 1215 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 TMCC3Q9ULS5 477 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PCDHGA5Q9Y5G8 931 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PCDHGA1Q9Y5H4 931 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 C3P01024 1663 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 EFCAB6Q5THR3 1501 aa3.21□□□□□ -1.9
UBXN4-208ENST00000490163 PTPRKQ15262 1439 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ERBINQ96RT1 1412 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 A8MVJ9 347 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 B4DLN1 442 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 DDAH2O95865 285 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PRR35P0CG20 571 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF28P17035 718 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SPINK2P20155 84 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PTAFRP25105 342 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 KRT20P35900 424 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 GMPRP36959 345 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 HADHAP40939 763 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ALDH18A1P54886 795 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MC1RQ01726 317 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 DNASE1L3Q13609 305 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 HYAL4Q2M3T9 481 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PCGF3Q3KNV8 242 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 KBTBD12Q3ZCT8 623 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SETMARQ53H47 684 aaPredicted RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZRANB3Q5FWF4 1079 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF484Q5JVG2 852 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ATPAF1Q5TC12 328 aaPredicted RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 KLHL17Q6TDP4 642 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 RAPH1Q70E73 1250 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 CATSPER4Q7RTX7 472 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 NUP54Q7Z3B4 507 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 RBM12BQ8IXT5 1001 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 OR8H3Q8N146 312 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 TMEM170AQ8WVE7 144 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZCCHC14Q8WYQ9 949 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 WDR92Q96MX6 357 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MOGAT1Q96PD6 335 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SLC6A15Q9H2J7 730 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 NELFAQ9H3P2 528 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PDZD7Q9H5P4 517 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 VPS45Q9NRW7 570 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 DCAF16Q9NXF7 216 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MOCS1Q9NZB8 636 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MKL2Q9ULH7 1088 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 RWDD3Q9Y3V2 267 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ATP10AO60312 1499 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 KNDC1Q76NI1 1749 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF804BA4D1E1 1349 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MATN2O00339 956 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PIP5K1BO14986 540 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SPAG6O75602 509 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 GNAI2P04899 355 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 HEXAP06865 529 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 EEF2P13639 858 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 STMN1P16949 149 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 GJC1P36383 396 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MAGEA10P43363 369 aaPredicted RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 GABRB2P47870 512 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 LOXL3P58215 753 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MXRA7P84157 204 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 LRRC24Q50LG9 513 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 TIGD5Q53EQ6 642 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 CRB2Q5IJ48 1285 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 TRAPPC3LQ5T215 181 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ARMC4Q5T2S8 1044 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PRAMEF9Q5VWM5 478 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ADALQ6DHV7 355 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PRRT2Q7Z6L0 340 aaPredicted RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 CREBRFQ8IUR6 639 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PLA2G15Q8NCC3 412 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 Q8NFD4 153 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PPP1R13BQ96KQ4 1090 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 C5orf34Q96MH7 638 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 KLHL32Q96NJ5 620 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF350Q9GZX5 532 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 CHMP4BQ9H444 224 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ZWILCHQ9H900 591 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ATP13A1Q9HD20 1204 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 DIAPH3Q9NSV4 1193 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 SNX14Q9Y5W7 946 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 HFM1A2PYH4 1435 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ABCC5O15440 1437 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 WDR27A2RRH5 827 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 DNM1LO00429 736 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 PROM1O43490 865 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 LETM1O95202 739 aaPredicted RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 METTL18O95568 372 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 DLDP09622 509 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ACADLP28330 430 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 CDC25BP30305 580 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 ATICP31939 592 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 CSE1LP55060 971 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 EXOSC9Q06265 439 aaKnown RBP3.2□□□□□ -1.9
UBXN4-208ENST00000490163 TBC1D8BQ0IIM8 1120 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 GALNT2Q10471 571 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 CAPSQ13938 189 aa3.2□□□□□ -1.9
UBXN4-208ENST00000490163 MMEL1Q495T6 779 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms