RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 TMLHEQ9NVH6 421 aa9.39□□□□□ -0.91
TNRC6B-208ENST00000489500 SIX4Q9UIU6 781 aa9.39□□□□□ -0.91
TNRC6B-208ENST00000489500 RCOR1Q9UKL0 485 aa9.39□□□□□ -0.91
TNRC6B-208ENST00000489500 USP18Q9UMW8 372 aa9.39□□□□□ -0.91
TNRC6B-208ENST00000489500 SPAG17Q6Q759 2223 aa9.39□□□□□ -0.91
TNRC6B-208ENST00000489500 CCDC163A0A0D9SF12 145 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 PDXKO00764 312 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 TRDMT1O14717 391 aaKnown RBP9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 TMPRSS2O15393 492 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 PRAMEF12O95522 483 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 RPN1P04843 607 aaKnown RBP9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 RETP07949 1114 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 PTPN1P18031 435 aaKnown RBP9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 CMA1P23946 247 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 RPL13P26373 211 aaKnown RBP9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 HOXA6P31267 233 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 SOX9P48436 509 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 GPR15P49685 360 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 CDR1P51861 262 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 PSMC1P62191 440 aaKnown RBP9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 SATB1Q01826 763 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 TNK2Q07912 1038 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 ZNF699Q32M78 642 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 MDH1BQ5I0G3 518 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 SDHAF4Q5VUM1 108 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 OSTM1Q86WC4 334 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 TP53INP2Q8IXH6 220 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 CAMKK1Q8N5S9 505 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 CXorf38Q8TB03 319 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 TAF4BQ92750 862 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 PCED1BQ96HM7 432 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 C8orf48Q96LL4 319 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 P2RY13Q9BPV8 354 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 MED10Q9BTT4 135 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 RBCK1Q9BYM8 510 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 KRTAP9-9Q9BYP9 154 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 KRTAP9-4Q9BYQ2 154 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 SCAND2PQ9GZW5 306 aaPredicted RBP9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 EBF3Q9H4W6 596 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 COMMD8Q9NX08 183 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 COL4A3Q01955 1670 aa9.38□□□□□ -0.91
TNRC6B-208ENST00000489500 GOLGA6L4A6NEF3 574 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 CHURC1-FNTBB4DL54 471 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 TGFB1I1O43294 461 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 ATP2C2O75185 946 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 CST3P01034 146 aaPredicted RBP9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 CCDC192P0DO97 292 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 KRT13P13646 458 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 TCF3P15923 654 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 LMO2P25791 158 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 YWHAQP27348 245 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 SYKP43405 635 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 FNTBP49356 437 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 NOP14P78316 857 aaKnown RBP9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 CUL4BQ13620 913 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 TMEM196Q5HYL7 178 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 HEATR6Q6AI08 1181 aaKnown RBP9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 LIMS2Q7Z4I7 341 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 TMEM150AQ86TG1 271 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 NUP93Q8N1F7 819 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 DCLK2Q8N568 766 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 ARL14EPQ8N8R7 260 aaPredicted RBP9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 B3GALNT2Q8NCR0 500 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 SH3RF2Q8TEC5 729 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 KBTBD7Q8WVZ9 684 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 OVCA2Q8WZ82 227 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 CD101Q93033 1021 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 ALKBH8Q96BT7 664 aaKnown RBP9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 PAGE5Q96GU1 130 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 DMRTB1Q96MA1 342 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 PKMYT1Q99640 499 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 NACA2Q9H009 215 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 ECT2Q9H8V3 914 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 RBM12Q9NTZ6 932 aaKnown RBP9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 CRIM1Q9NZV1 1036 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 TBC1D14Q9P2M4 693 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 ARHGAP26Q9UNA1 814 aa9.37□□□□□ -0.91
TNRC6B-208ENST00000489500 NCANO14594 1321 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 SHISA7A6NL88 538 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 IKBKBO14920 756 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 STX10O60499 249 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 HOXD13P35453 343 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 MYL6P60660 151 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 GOLGA8FQ08AF8 430 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 GOLGA8DPQ0D2H9 430 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 IFRD2Q12894 506 aaPredicted RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 BECN1Q14457 450 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 BTBD8Q5XKL5 378 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 OGFOD3Q6PK18 319 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 CBLL1Q75N03 491 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 CACNA2D4Q7Z3S7 1137 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 C11orf74Q86VG3 221 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 WDR5BQ86VZ2 330 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 UNC93AQ86WB7 457 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 TTC39CQ8N584 583 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 TMEM174Q8WUU8 243 aa9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 DDX1Q92499 740 aaKnown RBP9.36□□□□□ -0.91
TNRC6B-208ENST00000489500 FBXO32Q969P5 355 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms