RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 NEUROD6Q96NK8 337 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 C17orf80Q9BSJ5 609 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 DUSP26Q9BV47 211 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 MECRQ9BV79 373 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 DPCDQ9BVM2 203 aaPredicted RBP4.86□□□□□ -1.63
XRN1-213ENST00000489241 GPR63Q9BZJ6 419 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 JMJD4Q9H9V9 463 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 ARHGEF3Q9NR81 526 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 BLOC1S4Q9NUP1 217 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 NDUFAF4Q9P032 175 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 PI4KBQ9UBF8 816 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 NRBP1Q9UHY1 535 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 RPS6KL1Q9Y6S9 549 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 FAM90A20PA6NIJ5 464 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 TFRCP02786 760 aaKnown RBP4.85□□□□□ -1.63
XRN1-213ENST00000489241 ERBB2P04626 1255 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 PDHA1P08559 390 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 CYP21A2P08686 494 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 CD19P15391 556 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 PTH2RP49190 550 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 PDE1AP54750 535 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 TIRAPP58753 221 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 MTAPQ13126 283 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 CSHL1Q14406 222 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 ZNF169Q14929 603 aaPredicted RBP4.85□□□□□ -1.63
XRN1-213ENST00000489241 ACOX1Q15067 660 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 TBC1D25Q3MII6 688 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 TREML2Q5T2D2 321 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 LRCH2Q5VUJ6 765 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 CFAP161Q6P656 301 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 PIK3AP1Q6ZUJ8 805 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 PARS2Q7L3T8 475 aaKnown RBP4.85□□□□□ -1.63
XRN1-213ENST00000489241 GRASPQ7Z6J2 395 aaPredicted RBP4.85□□□□□ -1.63
XRN1-213ENST00000489241 FSTL5Q8N475 847 aaPredicted RBP4.85□□□□□ -1.63
XRN1-213ENST00000489241 METTL25Q8N6Q8 603 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 TSPYL6Q8N831 410 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 AGXT2Q9BYV1 514 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 ABHD16BQ9H3Z7 469 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 CCNL1Q9UK58 526 aaPredicted RBP4.85□□□□□ -1.63
XRN1-213ENST00000489241 DNAJC16Q9Y2G8 782 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 DERAQ9Y315 318 aa4.85□□□□□ -1.63
XRN1-213ENST00000489241 RRP7AQ9Y3A4 280 aaKnown RBP4.85□□□□□ -1.63
XRN1-213ENST00000489241 CCDC196A0A1B0GTZ2 297 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 DYTNA2CJ06 578 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 VWC2LB2RUY7 222 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 URI1O94763 535 aaPredicted RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 DLDP09622 509 aaKnown RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 NDUFB7P17568 137 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 PBX1P40424 430 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 RBM5P52756 815 aaKnown RBP eCLIP4.84□□□□□ -1.63
XRN1-213ENST00000489241 IRX6P78412 446 aaPredicted RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 SIM1P81133 766 aaPredicted RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 SF3A3Q12874 501 aaKnown RBP eCLIP4.84□□□□□ -1.63
XRN1-213ENST00000489241 CLCA4Q14CN2 919 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 FAM153CQ494X1 144 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 TMEM196Q5HYL7 178 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 L1TD1Q5T7N2 865 aaKnown RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 SLC9C2Q5TAH2 1124 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 SLC9A4Q6AI14 798 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 WDR53Q7Z5U6 358 aaPredicted RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 HMGB4Q8WW32 186 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 XAGE5Q8WWM1 108 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 SOCS4Q8WXH5 440 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 RFKQ969G6 155 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 ZBTB10Q96DT7 871 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 RSPRY1Q96DX4 576 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 PDLIM2Q96JY6 352 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 REEP2Q9BRK0 252 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 VN1R3Q9BXE9 311 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 PAIP1Q9H074 479 aaKnown RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 NOD2Q9HC29 1040 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 PREBQ9HCU5 417 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 TBC1D22BQ9NU19 505 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 SERTAD4Q9NUC0 356 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 DKK3Q9UBP4 350 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 NFU1Q9UMS0 254 aa4.84□□□□□ -1.63
XRN1-213ENST00000489241 DRG1Q9Y295 367 aaKnown RBP4.84□□□□□ -1.63
XRN1-213ENST00000489241 LMTK3Q96Q04 1460 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 SALL3Q9BXA9 1300 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 GXYLT2A0PJZ3 443 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 STX16-NPEPL1H3BU86 382 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 GCOM1H8Y6P7 765 aaPredicted RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 STX16O14662 325 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 CTIFO43310 598 aaKnown RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 WDR47O94967 919 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 LARGE1O95461 756 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 VNN1O95497 513 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 FESP07332 822 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 IL6RP08887 468 aaPredicted RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
XRN1-213ENST00000489241 MCM2P49736 904 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 RARRES1P49788 294 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 PDCLQ13371 301 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 KCTD2Q14681 263 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 ANKRD1Q15327 319 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 ATG16L1Q676U5 607 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 ANKRD16Q6P6B7 361 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 DSTYKQ6XUX3 929 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 RASGRP2Q7LDG7 609 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms