RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 PREPLQ4J6C6 727 aaPredicted RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 FAM133BQ5BKY9 247 aaKnown RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 CBWD5Q5RIA9 395 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 DEPDC1Q5TB30 811 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 LIPMQ5VYY2 423 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 CCDC144NLQ6NUI1 221 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 DPY19L2P1Q6NXN4 242 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 FAM43BQ6ZT52 329 aaPredicted RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 H1FNTQ75WM6 255 aaPredicted RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 B4GALNT4Q76KP1 1039 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 GSPT2Q8IYD1 628 aaKnown RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 ULK2Q8IYT8 1036 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 SYNE4Q8N205 404 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 NGEFQ8N5V2 710 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 METTL25Q8N6Q8 603 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 PTGR2Q8N8N7 351 aaPredicted RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 FAM71DQ8N9W8 422 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 CREB3L4Q8TEY5 395 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 ATG4AQ8WYN0 398 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 FAM136AQ96C01 138 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 RSPRY1Q96DX4 576 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 REXO5Q96IC2 774 aaKnown RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 MNTQ99583 582 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 SDF4Q9BRK5 362 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 PHF7Q9BWX1 381 aaPredicted RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 CCDC68Q9H2F9 335 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 NRDE2Q9H7Z3 1164 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 KRT84Q9NSB2 600 aa4.39□□□□□ -1.71
KDM3A-213ENST00000488971 DRG1Q9Y295 367 aaKnown RBP4.39□□□□□ -1.71
KDM3A-213ENST00000488971 A8MVJ9 347 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 PLOD3O60568 738 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 GUCY1B2O75343 617 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 SGPL1O95470 568 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 CFIP05156 583 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 RRM1P23921 792 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 HOXD12P35452 270 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 PNPLA4P41247 253 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 DGKQP52824 942 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 FAM3BP58499 235 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 RNASE9P60153 205 aaKnown RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 EIF4A1P60842 406 aaKnown RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 ARF3P61204 181 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 RBM6P78332 1123 aaKnown RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 ARF1P84077 181 aaKnown RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 FPGSQ05932 587 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 TBL3Q12788 808 aaKnown RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 ST3GAL2Q16842 350 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 AAK1Q2M2I8 961 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 P3H1Q32P28 736 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 AASDHQ4L235 1098 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 B3GNTL1Q67FW5 361 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 SLC9A4Q6AI14 798 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 SP5Q6BEB4 398 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 LAIR1Q6GTX8 287 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 DENND1BQ6P3S1 775 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 INO80CQ6PI98 192 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 CCDC129Q6ZRS4 1044 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 TMEM132CQ8N3T6 1108 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 ANKRD44Q8N8A2 993 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 LSMEM1Q8N8F7 131 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 C11orf44Q8N8P7 122 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 LSM14AQ8ND56 463 aaKnown RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 LINS1Q8NG48 757 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 STAMQ92783 540 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 APOPT1Q96IL0 206 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 FAR2Q96K12 515 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 PIGSQ96S52 555 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 CENPOQ9BU64 300 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 AMBRA1Q9C0C7 1298 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 GHITMQ9H3K2 345 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 RMI1Q9H9A7 625 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 IL21RQ9HBE5 538 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 ANKEF1Q9NU02 776 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 NKIRAS2Q9NYR9 191 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 NKX1-2Q9UD57 310 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-213ENST00000488971 GDAQ9Y2T3 454 aa4.38□□□□□ -1.71
KDM3A-213ENST00000488971 MARCH11A6NNE9 402 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 H3BNC9 293 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 M0QYT0 321 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 TRIM24O15164 1050 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 FOXN1O15353 648 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 NKX2-8O15522 239 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 PTP4A3O75365 173 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 TULP3O75386 442 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 TIPRLO75663 272 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 URI1O94763 535 aaPredicted RBP4.37□□□□□ -1.71
KDM3A-213ENST00000488971 TMEM225BP0DP42 221 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 TNNT1P13805 278 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 CHN1P15882 459 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 ALOX12P18054 663 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 DRD1P21728 446 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 BMP5P22003 454 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 PSMA4P25789 261 aaKnown RBP4.37□□□□□ -1.71
KDM3A-213ENST00000488971 THBS4P35443 961 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 HOXD13P35453 343 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 SCNN1GP51170 649 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 CXADRP78310 365 aa4.37□□□□□ -1.71
KDM3A-213ENST00000488971 RPP30P78346 268 aaKnown RBP4.37□□□□□ -1.71
KDM3A-213ENST00000488971 SEMA3BQ13214 749 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms