RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 MFSD7Q6UXD7 560 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 BNIPLQ7Z465 357 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 ADAT2Q7Z6V5 191 aaKnown RBP7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 MIB1Q86YT6 1006 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 RFX6Q8HWS3 928 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 ZNF276Q8N554 614 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 CCDC185Q8N715 623 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 MRPS31Q92665 395 aaKnown RBP7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 MRPL38Q96DV4 380 aaKnown RBP7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 CDCA3Q99618 268 aaPredicted RBP7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 CORO1BQ9BR76 489 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 SNRNP25Q9BV90 132 aaKnown RBP7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 HEMGNQ9BXL5 484 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 CALN1Q9BXU9 219 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 TKTL2Q9H0I9 626 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 ATXN3LQ9H3M9 355 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 CCSER2Q9H7U1 834 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 PIDD1Q9HB75 910 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 ASAH2Q9NR71 780 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 GPATCH2LQ9NWQ4 482 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 SMARCAL1Q9NZC9 954 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 MARCH2Q9P0N8 246 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 CALCOCO1Q9P1Z2 691 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 DNMT3LQ9UJW3 386 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 FZD10Q9ULW2 581 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 AP4E1Q9UPM8 1137 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 LAMA3Q16787 3333 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 GREB1Q4ZG55 1949 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 MYO16Q9Y6X6 1858 aa7.85□□□□□ -1.15
APOBEC3A-203ENST00000488758 ZNF638Q14966 1978 aaKnown RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 MTCL1Q9Y4B5 1905 aaKnown RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 PLXNA3P51805 1871 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 CCDC195A0A1B0GUA6 201 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 EPOPA6NHQ4 379 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 H3BRJ5 948 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 CCDC188H7C350 402 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 PDE2AO00408 941 aaPredicted RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 DAPK3O43293 454 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 MSI1O43347 362 aaKnown RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 APOEP02649 317 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 HMBSP08397 361 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 HDCP19113 662 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 CDC25CP30307 473 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 L1CAMP32004 1257 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 PTPN7P35236 360 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 ARL4AP40617 200 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 CDKN2BP42772 138 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 NRIP1P48552 1158 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 TUBP50607 506 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 COG7P83436 770 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 C2orf54Q08AI8 447 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 MTA1Q13330 715 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 PPP2R5DQ14738 602 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 TRIP4Q15650 581 aaPredicted RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 PPP2R5EQ16537 467 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 ZC3H12AQ5D1E8 599 aaKnown RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 OTUD1Q5VV17 481 aaPredicted RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 CYP4V2Q6ZWL3 525 aaPredicted RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 PDZD4Q76G19 769 aaPredicted RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 ADGRD2Q7Z7M1 963 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 VSIG1Q86XK7 387 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 ATP6V0D2Q8N8Y2 350 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 LEMD2Q8NC56 503 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 SPATA4Q8NEY3 305 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 NTAN1Q96AB6 310 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 HAPLN3Q96S86 360 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 AP1M1Q9BXS5 423 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 ZNF576Q9H609 170 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 IGFLR1Q9H665 355 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 IL21Q9HBE4 155 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 PCDH18Q9HCL0 1135 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 WDR6Q9NNW5 1121 aaKnown RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 ZDHHC7Q9NXF8 308 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 ARHGEF38Q9NXL2 777 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 STIM2Q9P246 746 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 RAPGEFL1Q9UHV5 662 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 TLR6Q9Y2C9 796 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 HBS1LQ9Y450 684 aaKnown RBP7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 HCFC2Q9Y5Z7 792 aa7.84□□□□□ -1.15
APOBEC3A-203ENST00000488758 UNC80Q8N2C7 3258 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 A0A0C4DFX4 3053 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 hCG_1818297A0A087WSY0 165 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 TRAV19A0A0A6YYK7 116 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 C3orf70A6NLC5 250 aaPredicted RBP7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 EFCAB8A8MWE9 144 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 EEF2KO00418 725 aaKnown RBP7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 ZNF197O14709 1029 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 COCHO43405 550 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 CREB3O43889 395 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 CST8O60676 142 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 RFPL2O75678 378 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 MOCS2O96007 188 aaPredicted RBP7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 CD48P09326 243 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 SRGAP2BP0DMP2 458 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 MBL2P11226 248 aaPredicted RBP7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 KRT10P13645 584 aa7.83□□□□□ -1.16
APOBEC3A-203ENST00000488758 ZFXP17010 805 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms