RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 VPS50Q96JG6 964 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 SCLT1Q96NL6 688 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 ZCWPW1Q9H0M4 648 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 TP63Q9H3D4 680 aaPredicted RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 SAP30LQ9HAJ7 183 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 LUZP4Q9P127 313 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 ADAMTS5Q9UNA0 930 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 PCDHB2Q9Y5E7 798 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 HMX3A6NHT5 357 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 KIF28PB7ZC32 967 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 M0QYT0 321 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 EXOC3O60645 756 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 PPP6R2O75170 966 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 RPP40O75818 363 aaKnown RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 ACTL6BO94805 426 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 TUBB4AP04350 444 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 ITGA2BP08514 1039 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 NPSP0C0P6 89 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 NR4A2P43354 598 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 GSTM5P46439 218 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 CCT4P50991 539 aaKnown RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 RENBPP51606 427 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 COPB1P53618 953 aaKnown RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 CYP4F2P78329 520 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 FOXO1Q12778 655 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 LMAN2Q12907 356 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 SEMA3BQ13214 749 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 CSHL1Q14406 222 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 KCNJ12Q14500 433 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 RNASE12Q5GAN4 147 aaKnown RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 ATPAF1Q5TC12 328 aaPredicted RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 FAM90A2PQ658T7 463 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 CCDC144NLQ6NUI1 221 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 ANKRD16Q6P6B7 361 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 ZNF517Q6ZMY9 492 aaPredicted RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 SLC29A4Q7RTT9 530 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 SLC44A2Q8IWA5 706 aaPredicted RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 NRSN1Q8IZ57 195 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 GALNT15Q8N3T1 639 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 CSGALNACT1Q8TDX6 532 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 OTUD7AQ8TE49 926 aaPredicted RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 SLC22A17Q8WUG5 538 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 TRAPPC12Q8WVT3 735 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 RUBCNQ92622 972 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 RILPL2Q969X0 211 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 EIF3CQ99613 913 aaKnown RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 NUDT22Q9BRQ3 303 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 RTKNQ9BST9 563 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 FAM167BQ9BTA0 163 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 MECRQ9BV79 373 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 TMEM120AQ9BXJ8 343 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 FSD1LQ9BXM9 530 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 BRD8Q9H0E9 1235 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 PABPC3Q9H361 631 aaKnown RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 USP29Q9HBJ7 922 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 TRIM36Q9NQ86 728 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.73□□□□□ -1.81
CD46-215ENST00000488596 SRP68Q9UHB9 627 aaKnown RBP3.73□□□□□ -1.81
CD46-215ENST00000488596 GPR52Q9Y2T5 361 aa3.73□□□□□ -1.81
CD46-215ENST00000488596 SMIM35A0A1B0GVV1 85 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 FAM90A18PA6NE21 464 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 FAM90A16PA6NEW6 464 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 FAM90A9PA6NNJ1 464 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 A8MVJ9 347 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 FAM90A5PA8MXJ8 464 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 KCNU1A8MYU2 1149 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 CTIFO43310 598 aaKnown RBP3.72□□□□□ -1.81
CD46-215ENST00000488596 TJP3O95049 919 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 FAM90A15PP0C7V4 464 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 FAM90A14PP0C7W9 464 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 DHRS4L1P0CG22 281 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 ADRA1DP25100 572 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 AP2B1P63010 937 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 DNASE1L3Q13609 305 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 ST3GAL2Q16842 350 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 KLHL22Q53GT1 634 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 AARS2Q5JTZ9 985 aaKnown RBP3.72□□□□□ -1.81
CD46-215ENST00000488596 KIRREL2Q6UWL6 708 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 KRT27Q7Z3Y8 459 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 MOGAT3Q86VF5 341 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 ZNF354CQ86Y25 554 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 FAM71DQ8N9W8 422 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 WDR60Q8WVS4 1066 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 TBC1D5Q92609 795 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 TRIM63Q969Q1 353 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 TRAPPC9Q96Q05 1148 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 THAP7Q9BT49 309 aaPredicted RBP3.72□□□□□ -1.81
CD46-215ENST00000488596 CIPCQ9C0C6 399 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 PRSS22Q9GZN4 317 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 VPS16Q9H269 839 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 TAF1DQ9H5J8 278 aaPredicted RBP3.72□□□□□ -1.81
CD46-215ENST00000488596 SEPSECSQ9HD40 501 aaKnown RBP3.72□□□□□ -1.81
CD46-215ENST00000488596 VPS45Q9NRW7 570 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 DAPP1Q9UN19 280 aa3.72□□□□□ -1.81
CD46-215ENST00000488596 CCDC187A0A096LP49 1063 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 B9A039 149 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 M0R3H8 397 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 CREB3O43889 395 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 TMPRSS11DO60235 418 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 PRAMEF2O60811 474 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms