RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 DENND1BQ6P3S1 775 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 RFWD3Q6PCD5 774 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 ANKS1BQ7Z6G8 1248 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 CPXM2Q8N436 756 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 ZNF366Q8N895 744 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 UCMAQ8WVF2 138 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 PIWIL1Q96J94 861 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 CNTNAP3BQ96NU0 1288 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 LSM14BQ9BX40 385 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 CNTNAP3Q9BZ76 1288 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 CD248Q9HCU0 757 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 ELOVL2Q9NXB9 296 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 THAP10Q9P2Z0 257 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 SLC27A6Q9Y2P4 619 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 HBS1LQ9Y450 684 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 MUC22E2RYF6 1773 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 GIPC1O14908 333 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 AP5Z1O43299 807 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 LETM1O95202 739 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 CFIP05156 583 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 NCAM1P13591 858 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 HLA-EP13747 358 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 SLC9A1P19634 815 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 HOXD9P28356 352 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 MAPK8P45983 427 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 ZNF132P52740 706 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 MARSP56192 900 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 GCNT1Q02742 428 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 ARID5AQ03989 594 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 ZNF33AQ06730 810 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 ZNF234Q14588 700 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 STARD3Q14849 445 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 STILQ15468 1287 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 FUT11Q495W5 492 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 MPPE1Q53F39 396 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 PSAPL1Q6NUJ1 521 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 FOXR2Q6PJQ5 311 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 SLC36A4Q6YBV0 504 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 SYT12Q8IV01 421 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 SLC41A1Q8IVJ1 513 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 SCUBE3Q8IX30 993 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 FAM217AQ8IXS0 508 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 TRIML1Q8N9V2 468 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 ADAM32Q8TC27 787 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 DDX1Q92499 740 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 GOLGA1Q92805 767 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 TMA16Q96EY4 203 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 MRGPRX1Q96LB2 322 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 MED15Q96RN5 788 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 NUSAP1Q9BXS6 441 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 TMEM9BQ9NQ34 198 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 STIM2Q9P246 746 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 DOCK4Q8N1I0 1966 aa11.78□□□□□ -0.52
NIPAL3-207ENST00000488155 CHD8Q9HCK8 2581 aa11.77□□□□□ -0.52
NIPAL3-207ENST00000488155 GFRA2O00451 464 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 CDX4O14627 284 aaPredicted RBP11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 THAP12O43422 761 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 SYNCRIPO60506 623 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 TBL1XO60907 577 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 NDUFS2O75306 463 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 KCNK5O95279 499 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 EPHX1P07099 455 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 PRKCHP24723 683 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 MAOBP27338 520 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 HLA-FP30511 346 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 GNA15P30679 374 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC6A4P31645 630 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 GPD2P43304 727 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 MTIF2P46199 727 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 NOVA1P51513 510 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 TBX4P57082 545 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 HSP90AA4PQ58FG1 418 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 ADGRF1Q5T601 910 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 DAB2IPQ5VWQ8 1189 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 MSANTD2Q6P1R3 559 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 CHST9Q7L1S5 443 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 TMPRSS6Q8IU80 811 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 RGL4Q8IZJ4 473 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 WFDC5Q8TCV5 224 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 ZNF606Q8WXB4 792 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 IRGQQ8WZA9 623 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 HSFY1Q96LI6 401 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 GTPBP2Q9BX10 602 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 MKRN2Q9H000 416 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 PRDM16Q9HAZ2 1276 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 CHMP5Q9NZZ3 219 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 RWDD2AQ9UIY3 292 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 PILRBQ9UKJ0 227 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 NAALADL1Q9UQQ1 740 aa11.77□□□□□ -0.53
NIPAL3-207ENST00000488155 PLXNA2O75051 1894 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 ACSL4O60488 711 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 ZNF217O75362 1048 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 FBXO21O94952 628 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 MOCS2O96007 188 aaPredicted RBP11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 FYNP06241 537 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms