RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ADRA1DP25100 572 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 RENBPP51606 427 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 SUMO2P61956 95 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 RAE1P78406 368 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 BFSP2Q13515 415 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 KLF9Q13886 244 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 RAPGEF1Q13905 1077 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 PRKG1Q13976 671 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 KCNJ12Q14500 433 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 ETFDHQ16134 617 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 ST3GAL2Q16842 350 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 FAM153CQ494X1 144 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 AWAT1Q58HT5 328 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 PLAC9Q5JTB6 97 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 PCID2Q5JVF3 399 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 SUMO4Q6EEV6 95 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 CCDC144NLQ6NUI1 221 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 ANKRD16Q6P6B7 361 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 KLHL17Q6TDP4 642 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 C16orf89Q6UX73 402 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 RRAGAQ7L523 313 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 TECPR1Q7Z6L1 1165 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 P3H2Q8IVL5 708 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 SLC44A2Q8IWA5 706 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 CLASRPQ8N2M8 674 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 SIRT6Q8N6T7 355 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 TRAPPC12Q8WVT3 735 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 REPS1Q96D71 796 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 EDC3Q96F86 508 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 KAZALD1Q96I82 304 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 MMS19Q96T76 1030 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 NUDT22Q9BRQ3 303 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 RTKNQ9BST9 563 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 VPS16Q9H269 839 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 SEPSECSQ9HD40 501 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 TRIM36Q9NQ86 728 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 WWOXQ9NZC7 414 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 MGAT4CQ9UBM8 478 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 SERGEFQ9UGK8 458 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 HERC5Q9UII4 1024 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 AMFRQ9UKV5 643 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 VPS4AQ9UN37 437 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 CNTN6Q9UQ52 1028 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 DGKBQ9Y6T7 804 aa3.31□□□□□ -1.88
R3HDM1-219ENST00000488035 CCDC187A0A096LP49 1063 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 LOC105369274A0A096LPK9 316 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 LOC102723532A0A0G2JNH3 316 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 GXYLT2A0PJZ3 443 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 HMX3A6NHT5 357 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 GCOM1H8Y6P7 765 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 M0R3H8 397 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 CREB3O43889 395 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 PRKCBP05771 671 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 HNRNPCP07910 306 aaKnown RBP eCLIP3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 FAM163BP0C2L3 166 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 DHRS4L1P0CG22 281 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 APEHP13798 732 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 CD19P15391 556 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 AP2B1P63010 937 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 GPC5P78333 572 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 DNASE1L3Q13609 305 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 CUL4BQ13620 913 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 TMEM95Q3KNT9 176 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 TRIM60Q495X7 471 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 C4orf46Q504U0 113 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 WDR53Q7Z5U6 358 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 BCDIN3DQ7Z5W3 292 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 MOGAT3Q86VF5 341 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 RAB11FIP4Q86YS3 637 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 OR4N4Q8N0Y3 316 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 GALNT15Q8N3T1 639 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 LINC01465Q8N7H1 131 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 SPATA5Q8NB90 893 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 ABHD11Q8NFV4 315 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 CSGALNACT1Q8TDX6 532 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 NPIPB3Q92617 1050 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 EVI5LQ96CN4 794 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 DDX23Q9BUQ8 820 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 CIPCQ9C0C6 399 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 ZCWPW1Q9H0M4 648 aa3.3□□□□□ -1.88
R3HDM1-219ENST00000488035 TMPRSS11DO60235 418 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 EXOC3O60645 756 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 DLDP09622 509 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 TMIGD3P0DMS9 266 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 ATF7P17544 494 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 CERS1P27544 350 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 GALNSP34059 522 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 GSTM5P46439 218 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 PLCD1P51178 756 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 COPB1P53618 953 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 SEMA3BQ13214 749 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 GAB1Q13480 694 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 LAMB3Q13751 1172 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 CSHL1Q14406 222 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 ZRSR2Q15696 482 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 GALNTL6Q49A17 601 aa3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 AARS2Q5JTZ9 985 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-219ENST00000488035 TTC22Q5TAA0 569 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms