RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ARL4AP40617 200 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 HCAR3P49019 387 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 PEX5P50542 639 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 KRT81Q14533 505 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 TEAD2Q15562 447 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 PPP2R5EQ16537 467 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 ZC3H12AQ5D1E8 599 aaKnown RBP11.45□□□□□ -0.58
HDLBP-242ENST00000488013 SH3PXD2AQ5TCZ1 1133 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 SEL1L2Q5TEA6 688 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 OTUD1Q5VV17 481 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-242ENST00000488013 EP400NLQ6ZTU2 488 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 CELF5Q8N6W0 485 aaKnown RBP11.45□□□□□ -0.58
HDLBP-242ENST00000488013 ARL14EPQ8N8R7 260 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-242ENST00000488013 SMRP1Q8NCR6 262 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 FCRL2Q96LA5 508 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-242ENST00000488013 FAM161BQ96MY7 647 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 ZNF670Q9BS34 389 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 MAK16Q9BXY0 300 aaKnown RBP11.45□□□□□ -0.58
HDLBP-242ENST00000488013 SLC46A2Q9BY10 475 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 TDP1Q9NUW8 608 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 TBC1D14Q9P2M4 693 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 PCSK1NQ9UHG2 260 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 CDH7Q9ULB5 785 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 FZD10Q9ULW2 581 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 SH3BP1Q9Y3L3 701 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 CHD7Q9P2D1 2997 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 SYNJ2BP-COX16A0A087WUM0 186 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 LRRD1A4D1F6 860 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 H3BRJ5 948 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 LINC01565O15544 149 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 TBX10O75333 385 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 MOSPD3O75425 235 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 ZNF189O75820 626 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 TJP3O95049 919 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 KRT1P04264 644 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 IL1R2P27930 398 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 CHKAP35790 457 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 CCR2P41597 374 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 MLLT6P55198 1093 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 TAS2R40P59535 323 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 RBM10P98175 930 aaKnown RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 CYP4F8P98187 520 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 SMAD4Q13485 552 aaKnown RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 TFDP2Q14188 446 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 SLC5A9Q2M3M2 681 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 TFDP3Q5H9I0 405 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 HTR3DQ70Z44 454 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 FAM71BQ8TC56 605 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 FGF13Q92913 245 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 SMARCD2Q92925 531 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 HLA-CQ95604 372 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 ACSF2Q96CM8 615 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 OTUB2Q96DC9 234 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 OSBPL9Q96SU4 736 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 RNF38Q9H0F5 515 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 GOLPH3Q9H4A6 298 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 TRPV4Q9HBA0 871 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 HOMER3Q9NSC5 361 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 THG1LQ9NWX6 298 aaKnown RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 COX16Q9P0S2 106 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 STOML2Q9UJZ1 356 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 NUDT5Q9UKK9 219 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 TTC7AQ9ULT0 858 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-242ENST00000488013 AP4E1Q9UPM8 1137 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 CPQQ9Y646 472 aa11.44□□□□□ -0.58
HDLBP-242ENST00000488013 NLRC5Q86WI3 1866 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 PLXNA4Q9HCM2 1894 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 TYW5A2RUC4 315 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 ENC1O14682 589 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 FGF10O15520 208 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 DDX3YO15523 660 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 MSI1O43347 362 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 ACSL4O60488 711 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 PAGE1O75459 146 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 STC2O76061 302 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 ATP1A1P05023 1023 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 TFE3P19532 575 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 LTBRP36941 435 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 PAFAH1B1P43034 410 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 CDH6P55285 790 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 PITX1P78337 314 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 CKAP4Q07065 602 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 CBX2Q14781 532 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 RABGAP1LQ5R372 815 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 ADGRF1Q5T601 910 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 CCDC181Q5TID7 509 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 TTC39BQ5VTQ0 682 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 MTSS1LQ765P7 747 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 BZW1Q7L1Q6 419 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 CCDC50Q8IVM0 306 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 NPAS3Q8IXF0 933 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 ZNF557Q8N988 423 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 MNS1Q8NEH6 495 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 ZSCAN18Q8TBC5 510 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 ACTRT1Q8TDG2 376 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms