RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 CKAP2Q8WWK9 683 aa23.44■■□□□ 1.34
LRRC1-203ENST00000487251 CFAP36Q96G28 342 aa23.44■■□□□ 1.34
LRRC1-203ENST00000487251 QKIQ96PU8 341 aaKnown RBP eCLIP23.44■■□□□ 1.34
LRRC1-203ENST00000487251 L3MBTL1Q9Y468 752 aa23.44■■□□□ 1.34
LRRC1-203ENST00000487251 ACTL7BQ9Y614 415 aa23.44■■□□□ 1.34
LRRC1-203ENST00000487251 FAM163BP0C2L3 166 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 BDNFP23560 247 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 STX2P32856 288 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 RPL9P32969 192 aaKnown RBP23.43■■□□□ 1.34
LRRC1-203ENST00000487251 ZKSCAN8Q15776 578 aaPredicted RBP23.43■■□□□ 1.34
LRRC1-203ENST00000487251 PIGWQ7Z7B1 504 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 TBC1D1Q86TI0 1168 aaPredicted RBP23.43■■□□□ 1.34
LRRC1-203ENST00000487251 KLC2Q9H0B6 622 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 SLC24A2Q9UI40 661 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 STAP1Q9ULZ2 295 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 PTPRDP23468 1912 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 SMAPO00193 183 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 SKAP2O75563 359 aaPredicted RBP23.43■■□□□ 1.34
LRRC1-203ENST00000487251 NCAM1P13591 858 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 GRIA1P42261 906 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 SP3Q02447 781 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 FAM133BQ5BKY9 247 aaKnown RBP23.43■■□□□ 1.34
LRRC1-203ENST00000487251 NSMCE1Q8WV22 266 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 NKIRAS1Q9NYS0 192 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 SHROOM3Q8TF72 1996 aa23.43■■□□□ 1.34
LRRC1-203ENST00000487251 TCRBV9S1A1TA0A576 114 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 FAM47DPA6NHR8 397 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 B4GALT3O60512 393 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 ZFXP17010 805 aaPredicted RBP23.42■■□□□ 1.34
LRRC1-203ENST00000487251 RAB41Q5JT25 222 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 HEATR6Q6AI08 1181 aaKnown RBP23.42■■□□□ 1.34
LRRC1-203ENST00000487251 BHLHA9Q7RTU4 235 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 PRPF39Q86UA1 669 aaKnown RBP23.42■■□□□ 1.34
LRRC1-203ENST00000487251 OR10T2Q8NGX3 314 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 DCAKDQ8WVC6 231 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 THOC1Q96FV9 657 aaKnown RBP23.42■■□□□ 1.34
LRRC1-203ENST00000487251 KLF6Q99612 283 aaPredicted RBP23.42■■□□□ 1.34
LRRC1-203ENST00000487251 EBF2Q9HAK2 575 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 NLRC5Q86WI3 1866 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 ODC1P11926 461 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 RPA3P35244 121 aaPredicted RBP23.42■■□□□ 1.34
LRRC1-203ENST00000487251 NUGGCQ68CJ6 796 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 LRRTM3Q86VH5 581 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 OLFM3Q96PB7 478 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 TRPV6Q9H1D0 765 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 WDR6Q9NNW5 1121 aaKnown RBP23.42■■□□□ 1.34
LRRC1-203ENST00000487251 SNX10Q9Y5X0 201 aa23.42■■□□□ 1.34
LRRC1-203ENST00000487251 DGKIO75912 1065 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 FOXN2P32314 431 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 NR2C2P49116 596 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 KBTBD12Q3ZCT8 623 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 DENND5BQ6ZUT9 1274 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 ANKS4BQ8N8V4 417 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 SMARCD1Q96GM5 515 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 DHRS4Q9BTZ2 278 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 PLAC1Q9HBJ0 212 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 ABCF3Q9NUQ8 709 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 GRID1Q9ULK0 1009 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 FRMPD3Q5JV73 1810 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 GOLGA8RI6L899 631 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 CST5P28325 142 aaPredicted RBP23.41■■□□□ 1.34
LRRC1-203ENST00000487251 RAB27AP51159 221 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 ACLYP53396 1101 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 PTK7Q13308 1070 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 ADGRD1Q6QNK2 874 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 ARHGEF18Q6ZSZ5 1173 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 ZNF534Q76KX8 674 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 MPP5Q8N3R9 675 aa23.41■■□□□ 1.34
LRRC1-203ENST00000487251 TGS1Q96RS0 853 aaKnown RBP23.41■■□□□ 1.34
LRRC1-203ENST00000487251 GCATO75600 419 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 ALDH1A1P00352 501 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 LTFP02788 710 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 GSTA1P08263 222 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 PCSK1P29120 753 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 ITIH4Q14624 930 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 CD99L2Q8TCZ2 262 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 TFB1MQ8WVM0 346 aaKnown RBP23.4■■□□□ 1.34
LRRC1-203ENST00000487251 HTR3CQ8WXA8 447 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 SMC6Q96SB8 1091 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 C12orf65Q9H3J6 166 aaKnown RBP23.4■■□□□ 1.34
LRRC1-203ENST00000487251 CNGB3Q9NQW8 809 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 PTCH2Q9Y6C5 1203 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 KRT4P19013 534 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 MSH2P43246 934 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 AP1B1Q10567 949 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 NR1H3Q13133 447 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 KLHL38Q2WGJ6 581 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 RTN4RL1Q86UN2 441 aaPredicted RBP23.4■■□□□ 1.34
LRRC1-203ENST00000487251 ECHDC2Q86YB7 292 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 VPS52Q8N1B4 723 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 PCSK9Q8NBP7 692 aaKnown RBP23.4■■□□□ 1.34
LRRC1-203ENST00000487251 MZB1Q8WU39 189 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 DDIT4Q9NX09 232 aa23.4■■□□□ 1.34
LRRC1-203ENST00000487251 EEF2KO00418 725 aaKnown RBP23.39■■□□□ 1.34
LRRC1-203ENST00000487251 FAM155BO75949 473 aa23.39■■□□□ 1.34
LRRC1-203ENST00000487251 FBXO21O94952 628 aa23.39■■□□□ 1.34
LRRC1-203ENST00000487251 IFRD2Q12894 506 aaPredicted RBP23.39■■□□□ 1.34
LRRC1-203ENST00000487251 GRIK3Q13003 919 aa23.39■■□□□ 1.34
LRRC1-203ENST00000487251 TUSC3Q13454 348 aa23.39■■□□□ 1.34
LRRC1-203ENST00000487251 SLC1A5Q15758 541 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms