RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 USP25Q9UHP3 1055 aa6.87□□□□□ -1.31
SOX2-OT-210ENST00000487240 NME7Q9Y5B8 376 aa6.87□□□□□ -1.31
SOX2-OT-210ENST00000487240 ATP6V1DQ9Y5K8 247 aa6.87□□□□□ -1.31
SOX2-OT-210ENST00000487240 PATJQ8NI35 1801 aa6.87□□□□□ -1.31
SOX2-OT-210ENST00000487240 ZNF638Q14966 1978 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 TRAV19A0A0A6YYK7 116 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 C2orf78A6NCI8 922 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 F8VP50 259 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 CLDN5O00501 218 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 PDXKO00764 312 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 CALUO43852 315 aaPredicted RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 KINO60870 393 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 RNGTTO60942 597 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 TACC1O75410 805 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 VNN1O95497 513 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 LMNAP02545 664 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 MYL1P05976 194 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 CHRNB1P11230 501 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ARSAP15289 507 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 PTPN1P18031 435 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 DDX6P26196 483 aaKnown RBP eCLIP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ATICP31939 592 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 MAGEA11P43364 429 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 RPS9P46781 194 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 CACNA2D1P54289 1103 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 CDH8P55286 799 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 LRRC32Q14392 662 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 BECN1Q14457 450 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 KCNB1Q14721 858 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 MAPRE1Q15691 268 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ITPRIPL2Q3MIP1 535 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ZNF667Q5HYK9 610 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 CC2D1AQ6P1N0 951 aaPredicted RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 VSTM1Q6UX27 236 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 KRBA2Q6ZNG9 492 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 Q6ZS52 159 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ARL14EPQ8N8R7 260 aaPredicted RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 RIN3Q8TB24 985 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 MYCBPAPQ8TBZ2 947 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 PARD3BQ8TEW8 1205 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ATRIPQ8WXE1 791 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 TRMT2BQ96GJ1 504 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 FUBP3Q96I24 572 aaKnown RBP eCLIP6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 SLC22A12Q96S37 553 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 MED10Q9BTT4 135 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ZNF518BQ9C0D4 1074 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 XYLT2Q9H1B5 865 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 EBF3Q9H4W6 596 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 MMRN2Q9H8L6 949 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 TDP1Q9NUW8 608 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 DMAC2Q9NW81 257 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 OBP2AQ9NY56 170 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 ADAM30Q9UKF2 790 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 FBXO4Q9UKT5 387 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 FRMD4BQ9Y2L6 1034 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 FRYLO94915 3013 aa6.86□□□□□ -1.31
SOX2-OT-210ENST00000487240 OTOGLQ3ZCN5 2332 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 OBSL1O75147 1896 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 KIF26AQ9ULI4 1882 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 FAM237AA0A1B0GTK4 181 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 A0A1W2PQ27 194 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 A0A1W2PQ64 194 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 A0A1W2PQD8 194 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 GOLGA6L4A6NEF3 574 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 ZNF202O95125 648 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 C4BPAP04003 597 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 TRIM49P0CI25 452 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 TRIM49CP0CI26 452 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 HDCP19113 662 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 RAB6AP20340 208 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 NR2F2P24468 414 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 PIK3CAP42336 1068 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 AP3M2P53677 418 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 SATB1Q01826 763 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 PNOCQ13519 176 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 RUNX3Q13761 415 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 MTF1Q14872 753 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 LPAL2Q16609 132 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 ZNF528Q3MIS6 628 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 TMEM201Q5SNT2 666 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 NAIF1Q69YI7 327 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 SPOPLQ6IQ16 392 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 DENND5BQ6ZUT9 1274 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 RALGPS2Q86X27 583 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 SMYD4Q8IYR2 804 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 DCLK2Q8N568 766 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 KCT2Q8NC54 265 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 B3GALNT2Q8NCR0 500 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 SH3RF2Q8TEC5 729 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 ISL2Q96A47 359 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 MSANTD3Q96H12 275 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 FAM46AQ96IP4 442 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 SPATA17Q96L03 361 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 UBL7Q96S82 380 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
SOX2-OT-210ENST00000487240 B3GNT5Q9BYG0 378 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms