RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SLC2A3P11169 496 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 PECAM1P16284 738 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 COL9A1P20849 921 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 IL4RP24394 825 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 ITGB8P26012 769 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 KLRC2P26717 231 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 YWHAQP27348 245 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 ECHS1P30084 290 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 HTR7P34969 479 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 OR1D2P34982 312 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 HCAR3P49019 387 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TPI1P60174 286 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 PITX1P78337 314 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 DSG1Q02413 1049 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 DHX9Q08211 1270 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TRIP13Q15645 432 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 DDR2Q16832 855 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 IZUMO3Q5VZ72 239 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 SLC8B1Q6J4K2 584 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 MSANTD2Q6P1R3 559 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 PSRC1Q6PGN9 363 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 ZDHHC24Q6UX98 284 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 C4orf22Q6V702 233 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TAS1R1Q7RTX1 841 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TMC3Q7Z5M5 1100 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 DDX53Q86TM3 631 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TAC4Q86UU9 113 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TMEM173Q86WV6 379 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 CDKL3Q8IVW4 592 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 GPR65Q8IYL9 337 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 FIBCD1Q8N539 461 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 PQLC3Q8N755 202 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 PLD5Q8N7P1 536 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 ATAD1Q8NBU5 361 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 PCDH19Q8TAB3 1148 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 ADAM32Q8TC27 787 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 FBXO25Q8TCJ0 367 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 BCL7CQ8WUZ0 217 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 UBLCP1Q8WVY7 318 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 SERPINB11Q96P15 392 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 CSPG4P5Q96PW8 444 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 CDK5RAP1Q96SZ6 601 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 SEPT5Q99719 369 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TMEM121Q9BTD3 319 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 ZBED2Q9BTP6 218 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 MCOLN1Q9GZU1 580 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 NEUROG2Q9H2A3 272 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 SMOC2Q9H3U7 446 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 RC3H2Q9HBD1 1191 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 WDR6Q9NNW5 1121 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 MED4Q9NPJ6 270 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 TLR8Q9NR97 1041 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 ZDHHC18Q9NUE0 388 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 MTMR10Q9NXD2 777 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 FAM53CQ9NYF3 392 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 IL37Q9NZH6 218 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 CWC15Q9P013 229 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 AFF4Q9UHB7 1163 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 MAFFQ9ULX9 164 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 NEU2Q9Y3R4 380 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 HEY1Q9Y5J3 304 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 RAD54BQ9Y620 910 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 FAM92AA1XBS5 289 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 BCLAF3A2AJT9 711 aaKnown RBP7.29□□□□□ -1.24
SF3A3-206ENST00000487062 WDR27A2RRH5 827 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 SLC38A8A6NNN8 435 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 HACD1B0YJ81 288 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 C2CD2LO14523 706 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 IRAK2O43187 625 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 PPFIA2O75334 1257 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 STK10O94804 968 aaKnown RBP7.29□□□□□ -1.24
SF3A3-206ENST00000487062 IGLV3-25P01717 112 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 CSH1P0DML2 217 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 CSH2P0DML3 217 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 GOT1P17174 413 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 AMPD1P23109 780 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 IVDP26440 423 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 CCR1P32246 355 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 ELF1P32519 619 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 SERPINB6P35237 376 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 VPS41P49754 854 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 ITGA8P53708 1063 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 PMS2P54278 862 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 FAM193AP78312 1265 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 GPS1Q13098 491 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 DUSP4Q13115 394 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 MTA1Q13330 715 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 PPP2R5DQ14738 602 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 VEPH1Q14D04 833 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 TAF12Q16514 161 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 P3H1Q32P28 736 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 ACBD5Q5T8D3 534 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-206ENST00000487062 SDHAF4Q5VUM1 108 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 NPNTQ6UXI9 565 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 LRIG3Q6UXM1 1119 aa7.29□□□□□ -1.24
SF3A3-206ENST00000487062 RSPO2Q6UXX9 243 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-206ENST00000487062 RFX8Q6ZV50 586 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms