RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NPR3P17342 541 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 BGNP21810 368 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 CPT1AP50416 773 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 CDK16Q00536 496 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 E2F5Q15329 346 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 TAF1BQ53T94 588 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 CDHR3Q6ZTQ4 885 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 DENND5BQ6ZUT9 1274 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 KCTD13Q8WZ19 329 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 NDRG1Q92597 394 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 UTP4Q969X6 686 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 TBC1D31Q96DN5 1066 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 DCTN4Q9UJW0 460 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 MFSD11O43934 449 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 UGT1A9O60656 530 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 FAM163BP0C2L3 166 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 NEFHP12036 1026 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 MLNP12872 115 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 PTPN1P18031 435 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 NOS2P35228 1153 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 GRIA1P42261 906 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 NBPF20Q3BBV1 942 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 DCAF6Q58WW2 860 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 TRMT10BQ6PF06 316 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 CYS1Q717R9 158 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 MTDHQ86UE4 582 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 NME8Q8N427 588 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 AGAP11Q8TF27 550 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 SLC7A6OSQ96CW6 309 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 ZIC5Q96T25 663 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 NPY6RQ99463 290 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 TRIM56Q9BRZ2 755 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 UGT1A7Q9HAW7 530 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 UGT1A10Q9HAW8 530 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 UGT1A8Q9HAW9 530 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 SAR1AQ9NR31 198 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 CPA4Q9UI42 421 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 PLLPQ9Y342 182 aa18.56■□□□□ 0.56
PDLIM7-207ENST00000486828 SF3B1O75533 1304 aaKnown RBP eCLIP18.55■□□□□ 0.563e-7■■■■■ 40.8
PDLIM7-207ENST00000486828 C17orf102A2RUQ5 167 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 H3BRJ5 948 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 CLDN5O00501 218 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 CYB561D2O14569 222 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 BEST1O76090 585 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 SERPINB9P50453 376 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 RASSF2P50749 326 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 PAQR9Q6ZVX9 377 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 CCDC91Q7Z6B0 441 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 CLNKQ7Z7G1 428 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 RNF139Q8WU17 664 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 LGMNQ99538 433 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 MOCS1Q9NZB8 636 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 STAP1Q9ULZ2 295 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 A0A0G2JND7 137 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 TRAFD1O14545 582 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 PTGESO14684 152 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 CBX6O95503 412 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 CCND1P24385 295 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 ACAT1P24752 427 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 ARFIP2P53365 341 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 PITX1P78337 314 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 BMPR2Q13873 1038 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 STEAP4Q687X5 459 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 ZNF449Q6P9G9 518 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 TRIM42Q8IWZ5 723 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 COLGALT1Q8NBJ5 622 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 STAMBPL1Q96FJ0 436 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 OXNAD1Q96HP4 312 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 CAPNS2Q96L46 248 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 PPP1R10Q96QC0 940 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 SLC2A13Q96QE2 648 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 KATNAL1Q9BW62 490 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 KCNK13Q9HB14 408 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 LRRC4Q9HBW1 653 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 EIF2B3Q9NR50 452 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 MTO1Q9Y2Z2 717 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 NR2E3Q9Y5X4 410 aa18.55■□□□□ 0.56
PDLIM7-207ENST00000486828 GABRDO14764 452 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 HNRNPCL1O60812 293 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 OPHN1O60890 802 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 WFS1O76024 890 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 STK10O94804 968 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 GLUD2P49448 558 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 INHBEP58166 350 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 BEX3Q00994 111 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 CTC1Q2NKJ3 1217 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 WSCD1Q658N2 575 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 TWF2Q6IBS0 349 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 CLEC20AQ6ZU45 233 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 DEPDC1BQ8WUY9 529 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 AP5M1Q9H0R1 490 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 NUMBLQ9Y6R0 609 aa18.54■□□□□ 0.56
PDLIM7-207ENST00000486828 HMX2A2RU54 273 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 M0QYT0 321 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 DLDP09622 509 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 HOXC8P31273 242 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 NDUFV1P49821 464 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 NOGQ13253 232 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 LRRC8BQ6P9F7 803 aa18.53■□□□□ 0.56
PDLIM7-207ENST00000486828 SIX6OS1Q8N1H7 587 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms