RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 WDCPQ9H6R7 721 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 KIF9Q9HAQ2 790 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 TMPRSS4Q9NRS4 437 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 GKN1Q9NS71 199 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 TDP1Q9NUW8 608 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 PCSK1NQ9UHG2 260 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 XPO7Q9UIA9 1087 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 STOML2Q9UJZ1 356 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 AMFRQ9UKV5 643 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 FZD10Q9ULW2 581 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 PACSIN2Q9UNF0 486 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 AP4E1Q9UPM8 1137 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 NEU3Q9UQ49 428 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 JRKLQ9Y4A0 524 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 PCDHA3Q9Y5H8 950 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 ANAPC1Q9H1A4 1944 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 CCDC66A2RUB6 948 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 ESPNB1AK53 854 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 GFRA2O00451 464 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF500O60304 480 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 APOEP02649 317 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 KLKB1P03952 638 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 HMBSP08397 361 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 KRT7P08729 469 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 RARAP10276 462 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 CORO1AP31146 461 aaKnown RBP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 ARSEP51690 589 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 NRG1Q02297 640 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 SEMA3BQ13214 749 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 MTA1Q13330 715 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 SMAD2Q15796 467 aaKnown RBP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 DPYSL2Q16555 572 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 CA9Q16790 459 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 BOLA3Q53S33 107 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 FAM133BQ5BKY9 247 aaKnown RBP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 EFHC2Q5JST6 749 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 KCNT1Q5JUK3 1230 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 ERMARDQ5T6L9 678 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 PIK3R6Q5UE93 754 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 DCAF12L1Q5VU92 463 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 SCYL2Q6P3W7 929 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 HTR3DQ70Z44 454 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 UNC45BQ8IWX7 931 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 FAM217AQ8IXS0 508 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 KIAA1958Q8N8K9 716 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 MAFAQ8NHW3 353 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 FAM71BQ8TC56 605 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 SH3RF2Q8TEC5 729 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 PPM1EQ8WY54 764 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 SMARCD2Q92925 531 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 AZIN2Q96A70 460 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 RSPRY1Q96DX4 576 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 BTN2A3PQ96KV6 586 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 HAPLN3Q96S86 360 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 ZWILCHQ9H900 591 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 GPATCH2LQ9NWQ4 482 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 OBP2AQ9NY56 170 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 CFAP97Q9P2B7 532 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 EPS15L1Q9UBC2 864 aa9.93□□□□□ -0.82
MCF2L-227ENST00000486806 ZFP37Q9Y6Q3 630 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-227ENST00000486806 DENND4CQ5VZ89 1909 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 E2F8A0AVK6 867 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 C3orf70A6NLC5 250 aaPredicted RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 ENC1O14682 589 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 PAGE1O75459 146 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 MOCS2O96007 188 aaPredicted RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 ATP1A1P05023 1023 aaKnown RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 IRF1P10914 325 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 LAMP2P13473 410 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 HOXC13P31276 330 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 GJC1P36383 396 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 SSR1P43307 286 aaKnown RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 HARS2P49590 506 aaKnown RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 ATP13A4Q4VNC1 1196 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 MS4A13Q5J8X5 152 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 ACBD5Q5T8D3 534 aaPredicted RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 MANEALQ5VSG8 457 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 NADSYN1Q6IA69 706 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 VSIG1Q86XK7 387 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF683Q8IZ20 524 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 CELF5Q8N6W0 485 aaKnown RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 ATP6V0D2Q8N8Y2 350 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 RAPGEF5Q92565 580 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 TSC1Q92574 1164 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 RNF34Q969K3 372 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 LRRC3BQ96PB8 259 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 KCTD15Q96SI1 283 aaPredicted RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 PRMT1Q99873 361 aaKnown RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 OSBPL2Q9H1P3 480 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 KLHL11Q9NVR0 708 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 DDX56Q9NY93 547 aaKnown RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 AGO1Q9UL18 857 aaKnown RBP9.92□□□□□ -0.82
MCF2L-227ENST00000486806 HS3ST4Q9Y661 456 aa9.92□□□□□ -0.82
MCF2L-227ENST00000486806 NUP210Q8TEM1 1887 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 MYO9BQ13459 2157 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms