RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.01■□□□□ 0.15
U2AF1-211ENST00000486519 GDF3Q9NR23 364 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 CACNA1DQ01668 2161 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 DOPEY1Q5JWR5 2465 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 A0A1B0GVM2 712 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 NPC1O15118 1278 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 OPA1O60313 960 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 STC2O76061 302 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 REC8O95072 547 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 CD38P28907 300 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 GNL1P36915 607 aaPredicted RBP16■□□□□ 0.15
U2AF1-211ENST00000486519 GALCP54803 685 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 ANKS1BQ7Z6G8 1248 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 FAM35AQ86V20 835 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 LSMEM2Q8N112 164 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 OR6B3Q8NGW1 331 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
U2AF1-211ENST00000486519 UCMAQ8WVF2 138 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 FOXP1Q9H334 677 aaPredicted RBP16■□□□□ 0.15
U2AF1-211ENST00000486519 THSD1Q9NS62 852 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 BLOC1S4Q9NUP1 217 aa16■□□□□ 0.15
U2AF1-211ENST00000486519 CASC3O15234 703 aaKnown RBP15.99■□□□□ 0.15
U2AF1-211ENST00000486519 PPP1R37O75864 691 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 DDIT3P35638 169 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 RXRGP48443 463 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 E2F1Q01094 437 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 GRIN1Q05586 938 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 MCM6Q14566 821 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 GPRIN1Q7Z2K8 1008 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 SLC25A45Q8N413 288 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 NOC3LQ8WTT2 800 aaKnown RBP15.99■□□□□ 0.15
U2AF1-211ENST00000486519 CBWD1Q9BRT8 395 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 OSBPL2Q9H1P3 480 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 SNX25Q9H3E2 840 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 SGK2Q9HBY8 427 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 LSM7Q9UK45 103 aaKnown RBP15.99■□□□□ 0.15
U2AF1-211ENST00000486519 NBASA2RRP1 2371 aa15.99■□□□□ 0.15
U2AF1-211ENST00000486519 SPENQ96T58 3664 aaKnown RBP15.99■□□□□ 0.15
U2AF1-211ENST00000486519 YKT6O15498 198 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 CYP26A1O43174 497 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 TMEM191BP0C7N4 346 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 ARRB1P49407 418 aaPredicted RBP15.98■□□□□ 0.15
U2AF1-211ENST00000486519 SERINC3Q13530 473 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 FNDC3BQ53EP0 1204 aaKnown RBP15.98■□□□□ 0.15
U2AF1-211ENST00000486519 DTHD1Q6ZMT9 781 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 TMC6Q7Z403 805 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 KRI1Q8N9T8 703 aaKnown RBP15.98■□□□□ 0.15
U2AF1-211ENST00000486519 SLC46A1Q96NT5 459 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 DEPDC7Q96QD5 511 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 SMOQ99835 787 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 PCIF1Q9H4Z3 704 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 CYLDQ9NQC7 956 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 INTS13Q9NVM9 706 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 UCKL1Q9NWZ5 548 aa15.98■□□□□ 0.15
U2AF1-211ENST00000486519 LY6G6EA0A0G2JKS1 128 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 ENO4A6NNW6 628 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 TLR4O00206 839 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 CST3P01034 146 aaPredicted RBP15.97■□□□□ 0.15
U2AF1-211ENST00000486519 DNTTP04053 509 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 CENPBP07199 599 aaPredicted RBP15.97■□□□□ 0.15
U2AF1-211ENST00000486519 TRAPPC10P48553 1259 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 EHHADHQ08426 723 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 SFR1Q86XK3 245 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 ELMO3Q96BJ8 720 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 ATXN7L3BQ96GX2 97 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 C8orf76Q96K31 380 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 STRA6Q9BX79 667 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 FGFBP2Q9BYJ0 223 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 EPN3Q9H201 632 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 NEUROG2Q9H2A3 272 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 U3KQA8 63 aa15.97■□□□□ 0.15
U2AF1-211ENST00000486519 CDRT15L2A8MXV6 281 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 HMBSP08397 361 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 GIMD1P0DJR0 217 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 ATP5C1P36542 298 aaKnown RBP15.96■□□□□ 0.15
U2AF1-211ENST00000486519 PRPHP41219 470 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 DAB2P98082 770 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 EIF4HQ15056 248 aaKnown RBP15.96■□□□□ 0.15
U2AF1-211ENST00000486519 ZNF720Q7Z2F6 126 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 SERAC1Q96JX3 654 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 PABPC3Q9H361 631 aaKnown RBP15.96■□□□□ 0.15
U2AF1-211ENST00000486519 ST6GALNAC4Q9H4F1 302 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.96■□□□□ 0.15
U2AF1-211ENST00000486519 WDR70Q9NW82 654 aa15.96■□□□□ 0.15
U2AF1-211ENST00000486519 ABCA12Q86UK0 2595 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 A0A1W2PP55 124 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 A0A1W2PQH9 124 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 A8MXQ7 604 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 FFAR2O15552 330 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 TACC1O75410 805 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 SCP2P22307 547 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 HLA-FP30511 346 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 CASP5P51878 434 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 PPP2CBP62714 309 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 PPP2CAP67775 309 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 ZNF211Q13398 564 aaPredicted RBP15.95■□□□□ 0.14
U2AF1-211ENST00000486519 TGIF1Q15583 401 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 SKIDA1Q1XH10 827 aa15.95■□□□□ 0.14
U2AF1-211ENST00000486519 ISXQ2M1V0 245 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms