RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
PDZD11-204ENST00000486461 VPS4AQ9UN37 437 aa6.29□□□□□ -1.4
PDZD11-204ENST00000486461 PCDHGA7Q9Y5G6 932 aa6.29□□□□□ -1.4
PDZD11-204ENST00000486461 ABCA2Q9BZC7 2435 aa6.29□□□□□ -1.4
PDZD11-204ENST00000486461 SPG11Q96JI7 2443 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 WIPF3A6NGB9 483 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 GABRDO14764 452 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 HNRNPDLO14979 420 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 TIMM44O43615 452 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 GREM1O60565 184 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 SEMA7AO75326 666 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 RTN3O95197 1032 aaPredicted RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 IGHDP01880 384 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 KRT7P08729 469 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 OR52Z1P0C646 297 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 RNF224P0DH78 156 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 GNLYP22749 145 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 DGKAP23743 735 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 CDC25AP30304 524 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 CCT6AP40227 531 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 HARS2P49590 506 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 CCR5P51681 352 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 PSMC1P62191 440 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 SFSWAPQ12872 951 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 MAPK7Q13164 816 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 KCNJ12Q14500 433 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 NAA30Q147X3 362 aaPredicted RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 FNDC3BQ53EP0 1204 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 ZNF776Q68DI1 518 aaPredicted RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 CAPRIN2Q6IMN6 1127 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 CPLX2Q6PUV4 134 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 USP30Q70CQ3 517 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 NUP93Q8N1F7 819 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 ZNF366Q8N895 744 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 TPCN2Q8NHX9 752 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 C9orf43Q8TAL5 461 aaPredicted RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 GTF3C6Q969F1 213 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 TMEM60Q9H2L4 133 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 FBXL12Q9NXK8 326 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 ACSL6Q9UKU0 697 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 CDH9Q9ULB4 789 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 TPX2Q9ULW0 747 aaKnown RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 SCML1Q9UN30 329 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 KIAA1024Q9UPX6 916 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 PCDHB11Q9Y5F2 797 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 SNX9Q9Y5X1 595 aa6.28□□□□□ -1.4
PDZD11-204ENST00000486461 COL27A1Q8IZC6 1860 aaPredicted RBP6.28□□□□□ -1.4
PDZD11-204ENST00000486461 OTOGQ6ZRI0 2925 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 MTORP42345 2549 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 A0A0B4J269 797 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 H0YCG3 227 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 TULP1O00294 542 aaPredicted RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 PLD2O14939 933 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 TCEA3O75764 348 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 PLS3P13797 630 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 WT1P19544 449 aaPredicted RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 POLR2BP30876 1174 aaKnown RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 ACOT2P49753 483 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 MLLT10P55197 1068 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 OVGP1Q12889 678 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 NR5A1Q13285 461 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 ECM1Q16610 540 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 SNX30Q5VWJ9 437 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 NAPEPLDQ6IQ20 393 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 BLOC1S2Q6QNY1 142 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 HS2ST1Q7LGA3 356 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 IQCHQ86VS3 1027 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 HEATR4Q86WZ0 1026 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 FBXL16Q8N461 479 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 FBXO39Q8N4B4 442 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 TOP6BLQ8N6T0 577 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 RBBP8NLQ8NC74 664 aaPredicted RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 OR2T34Q8NGX1 318 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 P2RY11Q96G91 374 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 PCED1BQ96HM7 432 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 PIWIL1Q96J94 861 aaKnown RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 RUSC1Q9BVN2 902 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 TIPINQ9BVW5 301 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 KLF16Q9BXK1 252 aaPredicted RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 AGXT2Q9BYV1 514 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 TMEM245Q9H330 911 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 PABPC3Q9H361 631 aaKnown RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 BRMS1Q9HCU9 246 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 CRTAC1Q9NQ79 661 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 PRSS16Q9NQE7 514 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 GJB4Q9NTQ9 266 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 DDX19AQ9NUU7 478 aaKnown RBP6.27□□□□□ -1.41
PDZD11-204ENST00000486461 UCKL1Q9NWZ5 548 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 GDAP2Q9NXN4 497 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 DONSONQ9NYP3 566 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 NLGN3Q9NZ94 848 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 PLA2G4CQ9UP65 541 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 AGAP1Q9UPQ3 857 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 HIVEP3Q5T1R4 2406 aa6.27□□□□□ -1.41
PDZD11-204ENST00000486461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.26□□□□□ -1.41
PDZD11-204ENST00000486461 LY6G6EA0A0G2JKS1 128 aa6.26□□□□□ -1.41
PDZD11-204ENST00000486461 A0A1W2PP55 124 aa6.26□□□□□ -1.41
PDZD11-204ENST00000486461 CPED1A4D0V7 1026 aa6.26□□□□□ -1.41
PDZD11-204ENST00000486461 NEMP2A6NFY4 417 aa6.26□□□□□ -1.41
PDZD11-204ENST00000486461 WNT7AO00755 349 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms