RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ZSWIM1Q9BR11 485 aa23.41■■□□□ 1.34
SREBF1-214ENST00000486311 CAPN10Q9HC96 672 aa23.41■■□□□ 1.34
SREBF1-214ENST00000486311 RNF225M0QZC1 329 aaPredicted RBP23.4■■□□□ 1.34
SREBF1-214ENST00000486311 TIMM44O43615 452 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 GABBR2O75899 941 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 LATS1O95835 1130 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 LCP1P13796 627 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 ZNF445P59923 1031 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 ZNF234Q14588 700 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 STILQ15468 1287 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 NELFBQ8WX92 580 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 IRGQQ8WZA9 623 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 KAT5Q92993 513 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 MKRN2Q9H000 416 aaKnown RBP23.4■■□□□ 1.34
SREBF1-214ENST00000486311 PRDM16Q9HAZ2 1276 aa23.4■■□□□ 1.34
SREBF1-214ENST00000486311 USP36Q9P275 1121 aaKnown RBP23.4■■□□□ 1.34
SREBF1-214ENST00000486311 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.4■■□□□ 1.34
SREBF1-214ENST00000486311 GON4LQ3T8J9 2241 aa23.39■■□□□ 1.34
SREBF1-214ENST00000486311 BICDL2A1A5D9 508 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 NDUFS2O75306 463 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 HOXD9P28356 352 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-214ENST00000486311 CD6P30203 668 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 RGS7P49802 495 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 GFPT1Q06210 699 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-214ENST00000486311 MORC3Q14149 939 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 TMEM215Q68D42 235 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 PMF1Q6P1K2 205 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 MSANTD2Q6P1R3 559 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 CIPCQ9C0C6 399 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 FSCN3Q9NQT6 498 aa23.39■■□□□ 1.33
SREBF1-214ENST00000486311 MSI1O43347 362 aaKnown RBP23.38■■□□□ 1.33
SREBF1-214ENST00000486311 SYNCRIPO60506 623 aaKnown RBP23.38■■□□□ 1.33
SREBF1-214ENST00000486311 TSPAN3O60637 253 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 NCAM1P13591 858 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 ATXN3P54252 364 aaPredicted RBP23.38■■□□□ 1.33
SREBF1-214ENST00000486311 GCNT1Q02742 428 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 ADGRF1Q5T601 910 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 DEFB124Q8NES8 71 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 SORCS1Q8WY21 1168 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 FOXJ1Q92949 421 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 HSFY1Q96LI6 401 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 ITM2CQ9NQX7 267 aa23.38■■□□□ 1.33
SREBF1-214ENST00000486311 TNRC6BQ9UPQ9 1833 aaKnown RBP23.38■■□□□ 1.33
SREBF1-214ENST00000486311 UPK3BL1B0FP48 263 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 UPK3BL2E5RIL1 263 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 M0QYV0 167 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 PRKCHP24723 683 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 BRD2P25440 801 aaKnown RBP23.37■■□□□ 1.33
SREBF1-214ENST00000486311 SYCP2LQ5T4T6 812 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 RRAGAQ7L523 313 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 TMPRSS6Q8IU80 811 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 ARHGEF19Q8IW93 802 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 TRIM59Q8IWR1 403 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 EHBP1Q8NDI1 1231 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 TMA16Q96EY4 203 aaKnown RBP23.37■■□□□ 1.33
SREBF1-214ENST00000486311 GTPBP2Q9BX10 602 aaKnown RBP23.37■■□□□ 1.33
SREBF1-214ENST00000486311 WSB2Q9NYS7 404 aaPredicted RBP23.37■■□□□ 1.33
SREBF1-214ENST00000486311 CTNND2Q9UQB3 1225 aa23.37■■□□□ 1.33
SREBF1-214ENST00000486311 ARHGAP33O14559 1287 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 GNA14O95837 355 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 IGLV3-27P01718 113 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 HLA-FP30511 346 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 MARSP56192 900 aaKnown RBP23.36■■□□□ 1.33
SREBF1-214ENST00000486311 SEMA3BQ13214 749 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 WDR45BQ5MNZ6 344 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 PIP4P1Q86T03 277 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 RGL4Q8IZJ4 473 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.36■■□□□ 1.333e-12■■■■□ 25.2
SREBF1-214ENST00000486311 WFIKKN2Q8TEU8 576 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 SIPA1Q96FS4 1042 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 TOE1Q96GM8 510 aaKnown RBP23.36■■□□□ 1.33
SREBF1-214ENST00000486311 IRX2Q9BZI1 471 aaPredicted RBP23.36■■□□□ 1.33
SREBF1-214ENST00000486311 SLC32A1Q9H598 525 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 SUSD2Q9UGT4 822 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 WASF3Q9UPY6 502 aa23.36■■□□□ 1.33
SREBF1-214ENST00000486311 USP24Q9UPU5 2620 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 PIK3R2O00459 728 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 BIN1O00499 593 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 FBXO21O94952 628 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 CALCAP01258 141 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 IGLV3-19P01714 112 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 LTFP02788 710 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 EPHX1P07099 455 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 OXTRP30559 389 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 TPMTP51580 245 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 COPAP53621 1224 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 ARID5AQ03989 594 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 KCNH2Q12809 1159 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 PAK1Q13153 545 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 SERPINA13PQ6UXR4 307 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 KIAA0907Q7Z7F0 614 aaPredicted RBP23.35■■□□□ 1.33
SREBF1-214ENST00000486311 HDDC3Q8N4P3 179 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 CLEC4CQ8WTT0 213 aa23.35■■□□□ 1.33
SREBF1-214ENST00000486311 PRCCQ92733 491 aaPredicted RBP23.35■■□□□ 1.33
SREBF1-214ENST00000486311 KCNJ18B7U540 433 aa23.34■■□□□ 1.33
SREBF1-214ENST00000486311 GADD45BO75293 160 aaPredicted RBP23.34■■□□□ 1.33
SREBF1-214ENST00000486311 AFPP02771 609 aaKnown RBP23.34■■□□□ 1.33
SREBF1-214ENST00000486311 SYPP08247 313 aa23.34■■□□□ 1.33
SREBF1-214ENST00000486311 STX17P56962 302 aa23.34■■□□□ 1.33
SREBF1-214ENST00000486311 RING1Q06587 406 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms