RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SLC27A6Q9Y2P4 619 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 ITPR2Q14571 2701 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 ICE1Q9Y2F5 2266 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 COL27A1Q8IZC6 1860 aaPredicted RBP8.73□□□□□ -1.01
XRN1-212ENST00000486211 A0A1W2PR77 199 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 C10orf142B7Z368 130 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 SYNCRIPO60506 623 aaKnown RBP8.73□□□□□ -1.01
XRN1-212ENST00000486211 HUS1O60921 280 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 CTDNEP1O95476 244 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 FAM87AP0C7U9 286 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 LMO2P25791 158 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 POLR2BP30876 1174 aaKnown RBP8.73□□□□□ -1.01
XRN1-212ENST00000486211 LHX1P48742 406 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 ACOT2P49753 483 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 SMTNP53814 917 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 BCAT1P54687 386 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 PSMC1P62191 440 aaKnown RBP8.73□□□□□ -1.01
XRN1-212ENST00000486211 ASIC1P78348 528 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 RAD51AP2Q09MP3 1159 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 ZNF234Q14588 700 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 GEN1Q17RS7 908 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 SOWAHAQ2M3V2 549 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.73□□□□□ -1.01
XRN1-212ENST00000486211 SNX30Q5VWJ9 437 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 TDRD10Q5VZ19 366 aaKnown RBP8.73□□□□□ -1.01
XRN1-212ENST00000486211 HTR3DQ70Z44 454 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 LIMS2Q7Z4I7 341 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 KBTBD7Q8WVZ9 684 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 EXTL1Q92935 676 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 LIN37Q96GY3 246 aaPredicted RBP8.73□□□□□ -1.01
XRN1-212ENST00000486211 C8orf48Q96LL4 319 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 SLITRK1Q96PX8 696 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 SYT15Q9BQS2 421 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 LHX5Q9H2C1 402 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 CCSER2Q9H7U1 834 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 EBF2Q9HAK2 575 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 PTPRJQ12913 1337 aa8.73□□□□□ -1.01
XRN1-212ENST00000486211 SPTBN1Q01082 2364 aaKnown RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 MYH10P35580 1976 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 MYH11P35749 1972 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 A0A1W2PPC4 97 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 TTLL8A6PVC2 850 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CDRT15L2A8MXV6 281 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 TRIM38O00635 465 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 WNT9AO14904 365 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 LZTS3O60299 673 aaPredicted RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 OPA1O60313 960 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CSO75390 466 aaKnown RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 CDKL5O76039 1030 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 ITGB2P05107 769 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 IRF1P10914 325 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 FDPSP14324 419 aaKnown RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 ANXA13P27216 316 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 RXRGP48443 463 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 TUBP50607 506 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 MFAP3P55082 362 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CDH8P55286 799 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 PTK2Q05397 1052 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CAMK2GQ13555 558 aaPredicted RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 IGFBP7Q16270 282 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 HECTD3Q5T447 861 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CRELD2Q6UXH1 353 aaPredicted RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 RUFY3Q7L099 469 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 DIS3L2Q8IYB7 885 aaKnown RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 TOP6BLQ8N6T0 577 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 C1orf127Q8N9H9 656 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 OR2T3Q8NH03 318 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 OVCA2Q8WZ82 227 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CCDC97Q96F63 343 aaPredicted RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 PRR11Q96HE9 360 aaPredicted RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 PCED1BQ96HM7 432 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 PCMTD1Q96MG8 357 aaPredicted RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 SLC46A1Q96NT5 459 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 DEPDC7Q96QD5 511 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CCNL2Q96S94 520 aaPredicted RBP8.72□□□□□ -1.01
XRN1-212ENST00000486211 BTBD1Q9H0C5 482 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 EPN3Q9H201 632 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 BRMS1Q9HCU9 246 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 PLK2Q9NYY3 685 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 TJP2Q9UDY2 1190 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 KCNG1Q9UIX4 513 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 CDH9Q9ULB4 789 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 AGAP1Q9UPQ3 857 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 DNM3Q9UQ16 869 aa8.72□□□□□ -1.01
XRN1-212ENST00000486211 NBASA2RRP1 2371 aa8.71□□□□□ -1.01
XRN1-212ENST00000486211 PMS2P1A4D2B8 440 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 TISP43B9A030 160 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 ANKRD63C9JTQ0 380 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 SIGLEC6O43699 453 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 ITGB3P05106 788 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 EPHX1P07099 455 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 ZDHHC11BP0C7U3 371 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 SFTPCP11686 197 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 YWHAQP27348 245 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 PSMA5P28066 241 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 ARRB1P49407 418 aaPredicted RBP8.71□□□□□ -1.02
XRN1-212ENST00000486211 PGFP49763 221 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 NXPH1P58417 271 aa8.71□□□□□ -1.02
XRN1-212ENST00000486211 POU5F1Q01860 360 aaKnown RBP8.71□□□□□ -1.02
XRN1-212ENST00000486211 CYP27A1Q02318 531 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms