RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 USP29Q9HBJ7 922 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 PCDHB2Q9Y5E7 798 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 TRAPPC8Q9Y2L5 1435 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 HECW2Q9P2P5 1572 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 EIF2AK4Q9P2K8 1649 aaKnown RBP6.88□□□□□ -1.31
RTN4-214ENST00000486085 AGLP35573 1532 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 ATP7AQ04656 1500 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 PTPRKQ15262 1439 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 ZNF213O14771 459 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
RTN4-214ENST00000486085 ACTL6BO94805 426 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 CER1O95813 267 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 PTH2RP49190 550 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 POLE2P56282 527 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 TXNL4AP83876 142 aaKnown RBP6.88□□□□□ -1.31
RTN4-214ENST00000486085 FOXO1Q12778 655 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 POSTNQ15063 836 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 BTBD16Q32M84 506 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 ATPAF1Q5TC12 328 aaPredicted RBP6.88□□□□□ -1.31
RTN4-214ENST00000486085 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 JMJD6Q6NYC1 403 aaPredicted RBP6.88□□□□□ -1.31
RTN4-214ENST00000486085 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 CEP85Q6P2H3 762 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 KRT27Q7Z3Y8 459 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 ARHGEF25Q86VW2 580 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 CLASRPQ8N2M8 674 aaKnown RBP6.88□□□□□ -1.31
RTN4-214ENST00000486085 PNPLA1Q8N8W4 532 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 FAM71DQ8N9W8 422 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 STT3BQ8TCJ2 826 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 MMS19Q96T76 1030 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 AGAP2Q99490 1192 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 RTKNQ9BST9 563 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 TFCP2L1Q9NZI6 479 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 SH3BP4Q9P0V3 963 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 ADAM21Q9UKJ8 722 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 VPS4AQ9UN37 437 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 PCDHB7Q9Y5E2 793 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 PCDHGB3Q9Y5G1 929 aa6.88□□□□□ -1.31
RTN4-214ENST00000486085 KIDINS220Q9ULH0 1771 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 ARHGEF40Q8TER5 1519 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 DUOX2Q9NRD8 1548 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 ZNF644Q9H582 1327 aaPredicted RBP6.87□□□□□ -1.31
RTN4-214ENST00000486085 CTIFO43310 598 aaKnown RBP6.87□□□□□ -1.31
RTN4-214ENST00000486085 ALADP13716 330 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 VEGFAP15692 232 aaPredicted RBP6.87□□□□□ -1.31
RTN4-214ENST00000486085 DNASE1L3Q13609 305 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 PRKG1Q13976 671 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 ZNF362Q5T0B9 420 aaPredicted RBP6.87□□□□□ -1.31
RTN4-214ENST00000486085 C12orf76Q8N812 135 aaPredicted RBP6.87□□□□□ -1.31
RTN4-214ENST00000486085 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.87□□□□□ -1.31
RTN4-214ENST00000486085 TERB1Q8NA31 727 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 SCAMP5Q8TAC9 235 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 SLC22A17Q8WUG5 538 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 OVCA2Q8WZ82 227 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 TBC1D20Q96BZ9 403 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 MCRS1Q96EZ8 462 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 TIMP4Q99727 224 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 CINPQ9BW66 212 aaPredicted RBP6.87□□□□□ -1.31
RTN4-214ENST00000486085 TMEM120AQ9BXJ8 343 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 VPS45Q9NRW7 570 aa6.87□□□□□ -1.31
RTN4-214ENST00000486085 NAIPQ13075 1403 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 ANKRD30AQ9BXX3 1397 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 IPO5O00410 1097 aaKnown RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 PRAMEF2O60811 474 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 RPP40O75818 363 aaKnown RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 TMIGD3P0DMS9 266 aaPredicted RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 GPD1P21695 349 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 PNLIPRP1P54315 467 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 SOX10P56693 466 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 AP2B1P63010 937 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 HOXA4Q00056 320 aaPredicted RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 COL10A1Q03692 680 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 CCDC15Q0P6D6 951 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 LDHAL6AQ6ZMR3 332 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 SLC44A2Q8IWA5 706 aaPredicted RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 OTUD7AQ8TE49 926 aaPredicted RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 RUBCNQ92622 972 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 TRIM63Q969Q1 353 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 DAZAP1Q96EP5 407 aaKnown RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 SCLT1Q96NL6 688 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 BBC3Q96PG8 261 aaPredicted RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 BRD8Q9H0E9 1235 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 PABPC3Q9H361 631 aaKnown RBP6.86□□□□□ -1.31
RTN4-214ENST00000486085 TMPRSS5Q9H3S3 457 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 FBXO28Q9NVF7 368 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 ZNHIT2Q9UHR6 403 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 INSL6Q9Y581 213 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 KDM6BO15054 1643 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 DIP2CQ9Y2E4 1556 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 KDM5DQ9BY66 1539 aa6.86□□□□□ -1.31
RTN4-214ENST00000486085 WDR33Q9C0J8 1336 aaKnown RBP6.85□□□□□ -1.31
RTN4-214ENST00000486085 KIF28PB7ZC32 967 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 M0QZQ0 153 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 PPP6R2O75170 966 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 JTBO76095 146 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 TSPY4P0CV99 314 aa6.85□□□□□ -1.31
RTN4-214ENST00000486085 TSPY10P0CW01 314 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms