RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 KLF15Q9UIH9 416 aa5.89□□□□□ -1.47
COPS3-208ENST00000486032 NAALADL1Q9UQQ1 740 aa5.89□□□□□ -1.47
COPS3-208ENST00000486032 SCML2Q9UQR0 700 aa5.89□□□□□ -1.47
COPS3-208ENST00000486032 USP15Q9Y4E8 981 aaPredicted RBP5.89□□□□□ -1.47
COPS3-208ENST00000486032 CLUHO75153 1309 aa5.89□□□□□ -1.47
COPS3-208ENST00000486032 DENND4AQ7Z401 1863 aa5.89□□□□□ -1.47
COPS3-208ENST00000486032 GREB1Q4ZG55 1949 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 ZNF638Q14966 1978 aaKnown RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 SLC12A8A0AV02 714 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TMEM110-MUSTN1A8MSY1 372 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 SCAMP3O14828 347 aaKnown RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 ZNF263O14978 683 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TLR5O60602 858 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 MOSPD3O75425 235 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 FBXO21O94952 628 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 NDUFA10O95299 355 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TBX18O95935 607 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 C1RP00736 705 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 CKMP06732 381 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 H2AFZP0C0S5 128 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 KRT3P12035 628 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 GZMAP12544 262 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 HDCP19113 662 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 MMP8P22894 467 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 SSR1P43307 286 aaKnown RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 NOP2P46087 812 aaKnown RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 SULT1E1P49888 294 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 GPC5P78333 572 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 CDK17Q00537 523 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 PTP4A2Q12974 167 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 SMAD4Q13485 552 aaKnown RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 ZNF268Q14587 947 aaPredicted RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 CDO1Q16878 200 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 ASTE1Q2TB18 679 aaPredicted RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 DCAF6Q58WW2 860 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 EFHC1Q5JVL4 640 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 C10orf120Q5SQS8 335 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 HECTD3Q5T447 861 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 OLFML1Q6UWY5 402 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TOGARAM2Q6ZUX3 1019 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 H2AFVQ71UI9 128 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 MON1BQ7L1V2 547 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 RTL10Q7L3V2 364 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 KIAA1328Q86T90 577 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TMEM150AQ86TG1 271 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 MON1AQ86VX9 555 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 PHF13Q86YI8 300 aaPredicted RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 TMEM139Q8IV31 216 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 CCDC170Q8IYT3 715 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 ARHGAP18Q8N392 663 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 LEMD2Q8NC56 503 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 SMRP1Q8NCR6 262 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 PDZD8Q8NEN9 1154 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 JOSD2Q8TAC2 188 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 ADAMTS19Q8TE59 1207 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 CTNNBL1Q8WYA6 563 aaPredicted RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 RNF34Q969K3 372 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TP53INP1Q96A56 240 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 ARHGEF26Q96DR7 871 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TRMT2BQ96GJ1 504 aaKnown RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 MCEEQ96PE7 176 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 ASB2Q96Q27 587 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 MYADMQ96S97 322 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TTLL2Q9BWV7 592 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 POPDC2Q9HBU9 364 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 WDR6Q9NNW5 1121 aaKnown RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 COMMD8Q9NX08 183 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 OSER1Q9NX31 292 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.88□□□□□ -1.47
COPS3-208ENST00000486032 CTTNBP2NLQ9P2B4 639 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 WDR35Q9P2L0 1181 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 STRIP2Q9ULQ0 834 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 COG5Q9UP83 839 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 USTQ9Y2C2 406 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 PCDHA13Q9Y5I0 950 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 EPN1Q9Y6I3 576 aaPredicted RBP5.88□□□□□ -1.47
COPS3-208ENST00000486032 USP3Q9Y6I4 520 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 PATJQ8NI35 1801 aa5.88□□□□□ -1.47
COPS3-208ENST00000486032 TRAV19A0A0A6YYK7 116 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 A0A0U1RQJ8 604 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ANKRD62A6NC57 917 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ZNF840PA6NDX5 716 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 EIF3CLB5ME19 914 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 M0QYT0 321 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ARHGAP6O43182 974 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 SART1O43290 800 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 MSI1O43347 362 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 COCHO43405 550 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 BUB1O43683 1085 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 HSF2BPO75031 334 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 DAB1O75553 588 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 FGF19O95750 216 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 MOCS2O96007 188 aaPredicted RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 PDGFRAP16234 1089 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 GPD1P21695 349 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 SDC4P31431 198 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 GJC1P36383 396 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ATP5C1P36542 298 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 FLT3P36888 993 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 AVPR1AP37288 418 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms