RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PTP4A3O75365 173 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 FLOT1O75955 427 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 BEST1O76090 585 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SEC24DO94855 1032 aaPredicted RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 REC8O95072 547 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PNPP00491 289 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PLGP00747 810 aaPredicted RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 IFNB1P01574 187 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ASGR1P07306 291 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ACADMP11310 421 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PRKCAP17252 672 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 EN2P19622 333 aaPredicted RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 DNAJB1P25685 340 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 EEF1GP26641 437 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 PDIA3P30101 505 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 SLC7A1P30825 629 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 IDUAP35475 653 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 THPOP40225 353 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 KCNJ4P48050 445 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 DIO1P49895 249 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 GALK1P51570 392 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 EPHB3P54753 998 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SLC12A3P55017 1021 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CYP4F8P98187 520 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ACY1Q03154 408 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 FSTL1Q12841 308 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 RIPK1Q13546 671 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PMS2P11Q13670 270 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 NOLC1Q14978 699 aaKnown RBP eCLIP4.75□□□□□ -1.651e-7■□□□□ 8
RTN4-213ENST00000485749 NR1I3Q14994 352 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 MORF4L2Q15014 288 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 RAB3GAP1Q15042 981 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ADIPOQQ15848 244 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 TSTQ16762 297 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 PFKFB4Q16877 469 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SLC35G1Q2M3R5 365 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CCDC57Q2TAC2 916 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 TCTE1Q5JU00 501 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 C8orf74Q6P047 294 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SLC30A9Q6PML9 568 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PET117Q6UWS5 81 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 LEKR1Q6ZMV7 388 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 GAREM2Q75VX8 874 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PIWIL3Q7Z3Z3 882 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 HEATR3Q7Z4Q2 680 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 FAM160B2Q86V87 743 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SESTD1Q86VW0 696 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CHD1LQ86WJ1 897 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 FAM129CQ86XR2 697 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 COL23A1Q86Y22 540 aaPredicted RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 C2CD5Q86YS7 1000 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 TTC39CQ8N584 583 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 DPP10Q8N608 796 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SLC4A11Q8NBS3 891 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 NUP43Q8NFH3 380 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CCDC110Q8TBZ0 833 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 DEPDC1BQ8WUY9 529 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ANKRD7Q92527 254 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 DPF2Q92785 391 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SMARCE1Q969G3 411 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ZNF566Q969W8 418 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 NMD3Q96D46 503 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 CYFIP2Q96F07 1278 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PEX11GQ96HA9 241 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CNOT6LQ96LI5 555 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 ATP6V0BQ99437 205 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 KIFC3Q9BVG8 833 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 NYXQ9GZU5 481 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 HAPLN2Q9GZV7 340 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PAIP1Q9H074 479 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 GLT8D2Q9H1C3 349 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 DPH5Q9H2P9 285 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 WDCPQ9H6R7 721 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 MANSC1Q9H8J5 431 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SARS2Q9NP81 518 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 HPS4Q9NQG7 708 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CNNM1Q9NRU3 951 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 GLRX2Q9NS18 164 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 TDP1Q9NUW8 608 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 GALNT8Q9NY28 637 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 HMG20BQ9P0W2 317 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CACNG4Q9UBN1 327 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 IL19Q9UHD0 177 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ATPIF1Q9UII2 106 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ANAPC5Q9UJX4 755 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 RCOR1Q9UKL0 485 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 CLCA2Q9UQC9 943 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PCDHA13Q9Y5I0 950 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 NSD2O96028 1365 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 TDRD9Q8NDG6 1382 aaKnown RBP4.75□□□□□ -1.65
RTN4-213ENST00000485749 WDR97A6NE52 1622 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 LRRC9Q6ZRR7 1453 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ARHGAP35Q9NRY4 1499 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 MAP3K19Q56UN5 1328 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 WDR19Q8NEZ3 1342 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 TIAM1Q13009 1591 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 RSPH10B2B2RC85 870 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 H0YCG3 227 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 H0YIV9 168 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms