RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 TIMM44O43615 452 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 TSPAN3O60637 253 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 KCNA4P22459 653 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 HOXD9P28356 352 aaPredicted RBP16.55■□□□□ 0.24
SIK3-211ENST00000485363 IL12RB1P42701 662 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 GPD2P43304 727 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 ACADSBP45954 432 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 SLC11A2P49281 568 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 ARID5AQ03989 594 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 ENPP2Q13822 863 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 MEA1Q16626 185 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 NUGGCQ68CJ6 796 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 MRGPRX1Q96LB2 322 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 CIPCQ9C0C6 399 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 ST7Q9NRC1 585 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 EVLQ9UI08 416 aaPredicted RBP16.55■□□□□ 0.24
SIK3-211ENST00000485363 PI4KAP42356 2102 aa16.55■□□□□ 0.24
SIK3-211ENST00000485363 C4orf47A7E2U8 309 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 SYNCRIPO60506 623 aaKnown RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 LETM1O95202 739 aaPredicted RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 IGLV3-27P01718 113 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 NCAM1P13591 858 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 ITPKAP23677 461 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 GNA15P30679 374 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 HOXD12P35452 270 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 RPL34P49207 117 aaKnown RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 TBX4P57082 545 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 IRX4P78413 519 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 RING1Q06587 406 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 LMAN2Q12907 356 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 ZNF234Q14588 700 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 TPD52L1Q16890 204 aaPredicted RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 FUT11Q495W5 492 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 TRIM61Q5EBN2 209 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 DAB2IPQ5VWQ8 1189 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 KIAA1324Q6UXG2 1013 aaKnown RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 GBP6Q6ZN66 633 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 WFIKKN2Q8TEU8 576 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 STK32AQ8WU08 396 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 ZNF606Q8WXB4 792 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 SERPINB11Q96P15 392 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 MED15Q96RN5 788 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 TRIM62Q9BVG3 475 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 NUSAP1Q9BXS6 441 aaKnown RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 IRX2Q9BZI1 471 aaPredicted RBP16.54■□□□□ 0.24
SIK3-211ENST00000485363 TMEM9BQ9NQ34 198 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 TMEM74BQ9NUR3 256 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 CYP8B1Q9UNU6 501 aa16.54■□□□□ 0.24
SIK3-211ENST00000485363 IRAK2O43187 625 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 THAP12O43422 761 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 NDUFS2O75306 463 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 SLC9A1P19634 815 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 MTIF2P46199 727 aaKnown RBP16.53■□□□□ 0.24
SIK3-211ENST00000485363 ZNF33AQ06730 810 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 EXOC3L4Q17RC7 722 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 MPP7Q5T2T1 576 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 DENND1BQ6P3S1 775 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 GJB7Q6PEY0 223 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 METTL3Q86U44 580 aaKnown RBP16.53■□□□□ 0.24
SIK3-211ENST00000485363 DEFB119Q8N690 84 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 AZIN2Q96A70 460 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 FAM149B1Q96BN6 582 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 SLC6A17Q9H1V8 727 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 CLSTN2Q9H4D0 955 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 PRDM16Q9HAZ2 1276 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 APEX2Q9UBZ4 518 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 PILRBQ9UKJ0 227 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 CKAP5Q14008 2032 aa16.53■□□□□ 0.24
SIK3-211ENST00000485363 ATXN2Q99700 1313 aaKnown RBP16.52■□□□□ 0.24
SIK3-211ENST00000485363 GTPBP10A4D1E9 387 aaKnown RBP16.52■□□□□ 0.24
SIK3-211ENST00000485363 CAPN9O14815 690 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 ACSL4O60488 711 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 FYNP06241 537 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 HLA-FP30511 346 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 USP8P40818 1118 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 ARHGAP44Q17R89 818 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 PEAR1Q5VY43 1037 aaPredicted RBP16.52■□□□□ 0.24
SIK3-211ENST00000485363 TMEM215Q68D42 235 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 RFWD3Q6PCD5 774 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 SLC23A3Q6PIS1 610 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 SERPINA13PQ6UXR4 307 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 BEND5Q7L4P6 421 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 RABEPKQ7Z6M1 372 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 IRF2BP1Q8IU81 584 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 FAM114A1Q8IWE2 563 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 AHI1Q8N157 1196 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.24
SIK3-211ENST00000485363 CEP76Q8TAP6 659 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 DQX1Q8TE96 717 aaKnown RBP16.52■□□□□ 0.24
SIK3-211ENST00000485363 SORCS1Q8WY21 1168 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 DDX50Q9BQ39 737 aaKnown RBP16.52■□□□□ 0.24
SIK3-211ENST00000485363 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 TLR6Q9Y2C9 796 aa16.52■□□□□ 0.24
SIK3-211ENST00000485363 GOLGA6L7A0A1B0GV03 622 aa16.51■□□□□ 0.23
SIK3-211ENST00000485363 CDX4O14627 284 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms