RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 AASDHQ4L235 1098 aaPredicted RBP4.8□□□□□ -1.64
SMC4-215ENST00000484799 TMEM196Q5HYL7 178 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.8□□□□□ -1.64
SMC4-215ENST00000484799 LIPMQ5VYY2 423 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 C9orf47Q6ZRZ4 202 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 CCAR1Q8IX12 1150 aaKnown RBP4.8□□□□□ -1.64
SMC4-215ENST00000484799 TXLNBQ8N3L3 684 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 C8orf48Q96LL4 319 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 SELENOOQ9BVL4 669 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 KRTAP1-5Q9BYS1 174 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 PRDM16Q9HAZ2 1276 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 FZD3Q9NPG1 666 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 CCDC187A0A096LP49 1063 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 CTIFO43310 598 aaKnown RBP4.79□□□□□ -1.64
SMC4-215ENST00000484799 NDUFB8O95169 186 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 HTR7P34969 479 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 SRSF1Q07955 248 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMC4-215ENST00000484799 IFIT5Q13325 482 aaKnown RBP4.79□□□□□ -1.64
SMC4-215ENST00000484799 DLGAP5Q15398 846 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 PIP4P1Q86T03 277 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 KRT78Q8N1N4 520 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 FAM47BQ8NA70 645 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 SRFBP1Q8NEF9 429 aaKnown RBP4.79□□□□□ -1.64
SMC4-215ENST00000484799 OR52L2PQ8NGH6 319 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 ZPBPQ9BS86 351 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
SMC4-215ENST00000484799 CDCP1Q9H5V8 836 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 MOV10Q9HCE1 1003 aaKnown RBP4.79□□□□□ -1.64
SMC4-215ENST00000484799 AGO4Q9HCK5 861 aaKnown RBP4.79□□□□□ -1.64
SMC4-215ENST00000484799 FBXO28Q9NVF7 368 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 SEMA5BQ9P283 1151 aa4.79□□□□□ -1.64
SMC4-215ENST00000484799 ZMYND8Q9ULU4 1186 aaPredicted RBP4.79□□□□□ -1.64
SMC4-215ENST00000484799 EMSYQ7Z589 1322 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 LACTBL1A8MY62 500 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 KIF3BO15066 747 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 KPNA5O15131 536 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 VIPP01282 170 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 TBXAS1P24557 533 aaPredicted RBP4.78□□□□□ -1.64
SMC4-215ENST00000484799 THBS4P35443 961 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 AGTR2P50052 363 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 HTR6P50406 440 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 PPATQ06203 517 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 PTGR1Q14914 329 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 KLHDC7AQ5VTJ3 777 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 ABLIM2Q6H8Q1 611 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 CCDC144NLQ6NUI1 221 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 FBXO38Q6PIJ6 1188 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 CRELD2Q6UXH1 353 aaPredicted RBP4.78□□□□□ -1.64
SMC4-215ENST00000484799 RFX8Q6ZV50 586 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.78□□□□□ -1.64
SMC4-215ENST00000484799 TFAP2DQ7Z6R9 452 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 PCDHAC1Q9H158 963 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 FAM50BQ9Y247 325 aa4.78□□□□□ -1.64
SMC4-215ENST00000484799 TTBK1Q5TCY1 1321 aaPredicted RBP4.77□□□□□ -1.65
SMC4-215ENST00000484799 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.77□□□□□ -1.65
SMC4-215ENST00000484799 TMEM272A0A1B0GTI8 110 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 APOL1O14791 398 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 PIK3CBP42338 1070 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 STT3AP46977 705 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 THBS3P49746 956 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 GAD2Q05329 585 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 ZNF543Q08ER8 600 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 ARL13BQ3SXY8 428 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 ACSM6Q6P461 480 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 PDXDC1Q6P996 788 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 DGKHQ86XP1 1220 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 LPAR1Q92633 364 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 TIFAQ96CG3 184 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 P2RY11Q96G91 374 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 ZNF845Q96IR2 970 aaPredicted RBP4.77□□□□□ -1.65
SMC4-215ENST00000484799 NTPCRQ9BSD7 190 aaKnown RBP4.77□□□□□ -1.65
SMC4-215ENST00000484799 ABHD14AQ9BUJ0 271 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 ERVK-5Q9HDB9 667 aa4.77□□□□□ -1.65
SMC4-215ENST00000484799 SPATA31A5Q5VU36 1347 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 SPATA31A7Q8IWB4 1347 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 CLCA1A8K7I4 914 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 PRYO14603 147 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 MBPP02686 304 aaPredicted RBP4.76□□□□□ -1.65
SMC4-215ENST00000484799 FGFR2P21802 821 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 NDUFS1P28331 727 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 IDUAP35475 653 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 HLTFQ14527 1009 aaKnown RBP eCLIP4.76□□□□□ -1.65
SMC4-215ENST00000484799 INPP5JQ15735 1006 aaPredicted RBP4.76□□□□□ -1.65
SMC4-215ENST00000484799 COBLL1Q53SF7 1204 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 ISM2Q6H9L7 571 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 KYAT3Q6YP21 454 aaKnown RBP4.76□□□□□ -1.65
SMC4-215ENST00000484799 CCDC28AQ8IWP9 274 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 WASF1Q92558 559 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 TMEM204Q9BSN7 226 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 SF3B5Q9BWJ5 86 aaKnown RBP4.76□□□□□ -1.65
SMC4-215ENST00000484799 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.76□□□□□ -1.65
SMC4-215ENST00000484799 VPS33BQ9H267 617 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 MRPL44Q9H9J2 332 aaKnown RBP4.76□□□□□ -1.65
SMC4-215ENST00000484799 HIF1ANQ9NWT6 349 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 MSRB1Q9NZV6 116 aa4.76□□□□□ -1.65
SMC4-215ENST00000484799 ARID4BQ4LE39 1312 aaPredicted RBP4.75□□□□□ -1.65
SMC4-215ENST00000484799 CCDC194A0A1B0GVG4 234 aa4.75□□□□□ -1.65
SMC4-215ENST00000484799 C16orf96A6NNT2 1141 aa4.75□□□□□ -1.65
SMC4-215ENST00000484799 PRC1O43663 620 aa4.75□□□□□ -1.65
SMC4-215ENST00000484799 NFATC1O95644 943 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms