RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SLC6A17Q9H1V8 727 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 CLEC4EQ9ULY5 219 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 CKAP5Q14008 2032 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 OPHN1O60890 802 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 NCAM1P13591 858 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 CD19P15391 556 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 MAPK8P45983 427 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 ATXN3P54252 364 aaPredicted RBP11.97□□□□□ -0.49
SCFD1-206ENST00000484733 ZNF234Q14588 700 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 SIX6OS1Q8N1H7 587 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 HDDC3Q8N4P3 179 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 UBA3Q8TBC4 463 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 NDRG1Q92597 394 aaKnown RBP11.97□□□□□ -0.49
SCFD1-206ENST00000484733 AZIN2Q96A70 460 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 NT5C1BQ96P26 610 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 IPO9Q96P70 1041 aaKnown RBP11.97□□□□□ -0.49
SCFD1-206ENST00000484733 YJEFN3A6XGL0 299 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 E7ENQ6 273 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 SYNCRIPO60506 623 aaKnown RBP11.96□□□□□ -0.49
SCFD1-206ENST00000484733 IGLV3-27P01718 113 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 HOXD9P28356 352 aaPredicted RBP11.96□□□□□ -0.49
SCFD1-206ENST00000484733 PI4KAP42356 2102 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 COPAP53621 1224 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 SLC14A1Q13336 389 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 BECN1Q14457 450 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 ADGRF1Q5T601 910 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 TMEM215Q68D42 235 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 LMO3Q8TAP4 145 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 HSFY1Q96LI6 401 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 ZDHHC5Q9C0B5 715 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 PCED1AQ9H1Q7 454 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 MAN1B1Q9UKM7 699 aa11.96□□□□□ -0.49
SCFD1-206ENST00000484733 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.5
SCFD1-206ENST00000484733 GJB3O75712 270 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 GABBR2O75899 941 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 GNSP15586 552 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 LRMPQ12912 555 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 FOXC1Q12948 553 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 MPP7Q5T2T1 576 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TMPRSS6Q8IU80 811 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 MINDY1Q8N5J2 469 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 KDF1Q8NAX2 398 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TFAP2BQ92481 460 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 PRCCQ92733 491 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TMA16Q96EY4 203 aaKnown RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 SIPA1Q96FS4 1042 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TOE1Q96GM8 510 aaKnown RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 MKRN2Q9H000 416 aaKnown RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 FBRSQ9HAH7 460 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 CD93Q9NPY3 652 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 SFMBT1Q9UHJ3 866 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 CNOT1A5YKK6 2376 aaKnown RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TMEM8BA6NDV4 472 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 KCNJ18B7U540 433 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 FBXO21O94952 628 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 CD59P13987 128 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 PRKCHP24723 683 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 RPL34P49207 117 aaKnown RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 RING1Q06587 406 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 CETN1Q12798 172 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 CAMK2GQ13555 558 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TTI2Q6NXR4 508 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TMEM270Q6UE05 265 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 ZNF557Q8N988 423 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 EDEM1Q92611 657 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 NUP58Q9BVL2 599 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 GTPBP2Q9BX10 602 aaKnown RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 TMEM245Q9H330 911 aa11.95□□□□□ -0.5
SCFD1-206ENST00000484733 MUC22E2RYF6 1773 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-206ENST00000484733 ACACBO00763 2458 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 A0A1B0GTW7 788 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 METTL12A8MUP2 240 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 H0Y626 953 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
SCFD1-206ENST00000484733 IRAK2O43187 625 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 TRIM16O95361 564 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 TPMTP51580 245 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
SCFD1-206ENST00000484733 GCNT1Q02742 428 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 PLEKHG6Q3KR16 790 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 CCDC40Q4G0X9 1142 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 PMF1Q6P1K2 205 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 RGL4Q8IZJ4 473 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 EHBP1Q8NDI1 1231 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 OR2T3Q8NH03 318 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 ERCC4Q92889 916 aaPredicted RBP11.94□□□□□ -0.5
SCFD1-206ENST00000484733 ZSWIM1Q9BR11 485 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 FSCN3Q9NQT6 498 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 CNTN6Q9UQ52 1028 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 NEUROG3Q9Y4Z2 214 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 BICDL2A1A5D9 508 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 GNA14O95837 355 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 LCP1P13796 627 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 HLA-FP30511 346 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms