RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 PODXLO00592 558 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 KIAA0355O15063 1070 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 VIPP01282 170 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 HNRNPCP07910 306 aaKnown RBP eCLIP3.41□□□□□ -1.86
PKP4-212ENST00000483881 PPP3CBP16298 524 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 CHRM3P20309 590 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 LIPAP38571 399 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 GRIA3P42263 894 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 CCT5P48643 541 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 HSPA7P48741 367 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 PGDP52209 483 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ZNF134P52741 427 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 PDE1AP54750 535 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 TRDNQ13061 729 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 BLMHQ13867 455 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 RAPGEF1Q13905 1077 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 TAF11Q15544 211 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SLC5A9Q2M3M2 681 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ATPAF1Q5TC12 328 aaPredicted RBP3.41□□□□□ -1.86
PKP4-212ENST00000483881 KIAA0895LQ68EN5 471 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 C16orf54Q6UWD8 224 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 LCA5Q86VQ0 697 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 VRK3Q8IV63 474 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 LIX1LQ8IVB5 337 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ARL6IP6Q8N6S5 226 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 CELF5Q8N6W0 485 aaKnown RBP3.41□□□□□ -1.86
PKP4-212ENST00000483881 NKAIN3Q8N8D7 197 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 CCDC89Q8N998 374 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 CCDC191Q8NCU4 936 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ABHD11Q8NFV4 315 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 TBC1D22AQ8WUA7 517 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 C17orf50Q8WW18 174 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ZFPM2Q8WW38 1151 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 OVCA2Q8WZ82 227 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 CCT6BQ92526 530 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 MUL1Q969V5 352 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 GRAMD1AQ96CP6 724 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ABHD8Q96I13 439 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ADAM2Q99965 735 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 TTLL2Q9BWV7 592 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 VN1R3Q9BXE9 311 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 TEX101Q9BY14 249 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.41□□□□□ -1.862e-8■■■□□ 18.2
PKP4-212ENST00000483881 SLC25A32Q9H2D1 315 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SMOC2Q9H3U7 446 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SYNPO2LQ9H987 977 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 GBA2Q9HCG7 927 aaPredicted RBP3.41□□□□□ -1.86
PKP4-212ENST00000483881 ARHGEF3Q9NR81 526 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SNX15Q9NRS6 342 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 RGL1Q9NZL6 768 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 ANKFY1Q9P2R3 1169 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 TAGLN3Q9UI15 199 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SERTAD3Q9UJW9 196 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 BLOC1S6Q9UL45 172 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SLC39A10Q9ULF5 831 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 HPSEQ9Y251 543 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 COX11Q9Y6N1 276 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 FHOD3Q2V2M9 1422 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SETD5Q9C0A6 1442 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 SALL3Q9BXA9 1300 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 LRRC9Q6ZRR7 1453 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 FANCD2Q9BXW9 1451 aa3.41□□□□□ -1.86
PKP4-212ENST00000483881 TOPBP1Q92547 1522 aa3.4□□□□□ -1.86
PKP4-212ENST00000483881 DYTNA2CJ06 578 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 SERINC4A6NH21 518 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 UNC119BA6NIH7 251 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 A8MVJ9 347 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 EFCAB8A8MWE9 144 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 TMEM233B4DJY2 109 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 F8VZ95 297 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 ZSCAN9O15535 394 aaPredicted RBP3.4□□□□□ -1.87
PKP4-212ENST00000483881 TMPRSS11DO60235 418 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 LPXNO60711 386 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 SRGAP2O75044 1071 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 BAIAP3O94812 1187 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 NPSP0C0P6 89 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 HARSP12081 509 aaKnown RBP3.4□□□□□ -1.87
PKP4-212ENST00000483881 IL1R1P14778 569 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 XBP1P17861 261 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 EGR1P18146 543 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 ABCB4P21439 1286 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 NR4A1P22736 598 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 UQCRC1P31930 480 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 ZNF131P52739 623 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 TPTEP56180 551 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 TIRAPP58753 221 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 TIAL1Q01085 375 aaKnown RBP eCLIP3.4□□□□□ -1.87
PKP4-212ENST00000483881 DDX10Q13206 875 aaKnown RBP3.4□□□□□ -1.87
PKP4-212ENST00000483881 ATP1A4Q13733 1029 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 BOP1Q14137 746 aaKnown RBP3.4□□□□□ -1.87
PKP4-212ENST00000483881 PTK2BQ14289 1009 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 CSHL1Q14406 222 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 PPP2R5BQ15173 497 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 PUM3Q15397 648 aaKnown RBP3.4□□□□□ -1.87
PKP4-212ENST00000483881 TAF7Q15545 349 aaPredicted RBP3.4□□□□□ -1.87
PKP4-212ENST00000483881 MPEG1Q2M385 716 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 SLC35G1Q2M3R5 365 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 GRAMD1BQ3KR37 738 aa3.4□□□□□ -1.87
PKP4-212ENST00000483881 INO80DQ53TQ3 878 aaPredicted RBP3.4□□□□□ -1.87
PKP4-212ENST00000483881 AARS2Q5JTZ9 985 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms