RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 CHRNA5P30532 468 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 NUDT2P50583 147 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 SPIDRQ14159 915 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 DCAF6Q58WW2 860 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 FAM102BQ5T8I3 360 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 FAXCQ5TGI0 409 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 C15orf39Q6ZRI6 1047 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 TMEM102Q8N9M5 508 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 BHLHE22Q8NFJ8 381 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 LENG8Q96PV6 779 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 CDRT15Q96T59 188 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 FAM213AQ9BRX8 229 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 NUF2Q9BZD4 464 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 IGSF9Q9P2J2 1179 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 NR2E3Q9Y5X4 410 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 H3BNH8 94 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 K7EPI3 171 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 NOP56O00567 594 aaKnown RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 RNASEH2AO75792 299 aaKnown RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 NDUFB10O96000 172 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 CAPNS1P04632 268 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 DPEP1P16444 411 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 KDELR1P24390 212 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 GABRB2P47870 512 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 GTF2IP78347 998 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 ZNF423Q2M1K9 1284 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 PPM1LQ5SGD2 360 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 N4BP2L1Q5TBK1 243 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 CYP4A22Q5TCH4 519 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 ZFP1Q6P2D0 407 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 C15orf52Q6ZUT6 534 aaKnown RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 CCDC80Q76M96 950 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 RFX6Q8HWS3 928 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 TMEM126BQ8IUX1 230 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 CENPSQ8N2Z9 138 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 ARFGAP1Q8N6T3 406 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 TMEM161BQ8NDZ6 487 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 C17orf50Q8WW18 174 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 USP13Q92995 863 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 C12orf43Q96C57 262 aaKnown RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 ISOC1Q96CN7 298 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 FBXL18Q96ME1 805 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 KLHL32Q96NJ5 620 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 DHX33Q9H6R0 707 aaKnown RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 NYAP2Q9P242 653 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 FADS3Q9Y5Q0 445 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 PLOD2O00469 737 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 CFLARO15519 480 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 BBOX1O75936 387 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 HLA-DOAP06340 250 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 SERPINB5P36952 375 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 SLC25A11Q02978 314 aaKnown RBP12.15□□□□□ -0.46
VTI1A-205ENST00000483122 CD300CQ08708 224 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 NFIAQ12857 509 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 SLC10A2Q12908 348 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-205ENST00000483122 CUL2Q13617 745 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 PCLAFQ15004 111 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 TDRD10Q5VZ19 366 aaKnown RBP12.15□□□□□ -0.46
VTI1A-205ENST00000483122 GPR180Q86V85 440 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 C10orf107Q8IVU9 208 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 HEPHQ9BQS7 1158 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 OLAHQ9NV23 265 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 TRNAU1APQ9NX07 287 aaKnown RBP12.15□□□□□ -0.46
VTI1A-205ENST00000483122 TMEM98Q9Y2Y6 226 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 CROCCQ5TZA2 2017 aa12.15□□□□□ -0.46
VTI1A-205ENST00000483122 ARHGEF37A1IGU5 675 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 PSMD12O00232 456 aaPredicted RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 ENTPD3O75355 529 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 VNN1O95497 513 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 ZBTB11O95625 1053 aaPredicted RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 APOEP02649 317 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 MYL4P12829 197 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 P4HA1P13674 534 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 EIF2AK2P19525 551 aaKnown RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 GMPRP36959 345 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 PPARGP37231 505 aaPredicted RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 TXNL4AP83876 142 aaKnown RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 ATP1A4Q13733 1029 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 CEACAM7Q14002 265 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 PIGHQ14442 188 aaPredicted RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 TAF5Q15542 800 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 ABCB5Q2M3G0 1257 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 SLC9B1Q4ZJI4 515 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 SCARA3Q6AZY7 606 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 NANOGP8Q6NSW7 305 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 DARS2Q6PI48 645 aaKnown RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 UNC5AQ6ZN44 842 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 DSELQ8IZU8 1212 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 GPD1LQ8N335 351 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 ZNF606Q8WXB4 792 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 ERLEC1Q96DZ1 483 aa12.15□□□□□ -0.47
VTI1A-205ENST00000483122 GPATCH1Q9BRR8 931 aaKnown RBP12.15□□□□□ -0.47
VTI1A-205ENST00000483122 SEMA6AQ9H2E6 1030 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms