RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 C4orf47A7E2U8 309 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 TTC34A8MYJ7 566 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 HMGB1P1B2RPK0 211 aaPredicted RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 SLC28A2O43868 658 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 ATG13O75143 517 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 ZC3H11AO75152 810 aaKnown RBP eCLIP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 SLC3A2P08195 630 aaKnown RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 HOXB2P14652 356 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 TFEBP19484 476 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 IGHMBP2P38935 993 aaKnown RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 RHDQ02161 417 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 GPS1Q13098 491 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 SEMA5AQ13591 1074 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 GALEQ14376 348 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 PTGR1Q14914 329 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 TMEM196Q5HYL7 178 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 CRTC1Q6UUV9 634 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 KYAT3Q6YP21 454 aaKnown RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 GJA10Q969M2 543 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 WDR24Q96S15 920 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 STRBPQ96SI9 672 aaKnown RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 PIMREGQ9BSJ6 248 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 TTLL2Q9BWV7 592 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 RNF26Q9BY78 433 aaPredicted RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 AAMDCQ9H7C9 122 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 THSD1Q9NS62 852 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 KLHL42Q9P2K6 505 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 ANAPC4Q9UJX5 808 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 AGO2Q9UKV8 859 aaKnown RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 CORO2BQ9UQ03 480 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 SNX13Q9Y5W8 968 aa3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 TRIP12Q14669 1992 aaPredicted RBP3.61□□□□□ -1.83
LAPTM4A-202ENST00000483117 LOC102724159A0A0B4J2E5 919 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 PRSS44E7EML9 344 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 IL18RAPO95256 599 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 NGFRP08138 427 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 ALADP13716 330 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 RHCEP18577 417 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 CDC25AP30304 524 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 ZNF84P51523 738 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 P2RX3P56373 397 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 ZXDBP98169 803 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 GBX1Q14549 363 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 PWP2Q15269 919 aaKnown RBP3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 ELF2Q15723 593 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 SMTNL2Q2TAL5 461 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 FAM90A2PQ658T7 463 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 DHRS13Q6UX07 377 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 KRT28Q7Z3Y7 464 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 RHPN2Q8IUC4 686 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 ARL14EPQ8N8R7 260 aaPredicted RBP3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 ABHD5Q8WTS1 349 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 JDP2Q8WYK2 163 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 EME1Q96AY2 570 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 IQCDQ96DY2 449 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 LRRC46Q96FV0 321 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 BTBD1Q9H0C5 482 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 SLCO5A1Q9H2Y9 848 aa3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 TCF20Q9UGU0 1960 aaKnown RBP3.6□□□□□ -1.83
LAPTM4A-202ENST00000483117 A6NNC1 897 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 TPD52L2O43399 206 aaKnown RBP3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 THAP12O43422 761 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 TSPAN6O43657 245 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 CCNT2O60583 730 aaKnown RBP3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 COQ9O75208 318 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 CHRNB1P11230 501 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 MATN1P21941 496 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 TNFRSF8P28908 595 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 HOXA11P31270 313 aaPredicted RBP3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 ARRB2P32121 409 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 STAT6P42226 847 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 POLD2P49005 469 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 AGTR2P50052 363 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 DAG1Q14118 895 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 PGM5Q15124 567 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 FAXCQ5TGI0 409 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 KLHDC7AQ5VTJ3 777 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 TTLL5Q6EMB2 1281 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 ADHFE1Q8IWW8 467 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 CCAR1Q8IX12 1150 aaKnown RBP3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 KRT78Q8N1N4 520 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 MYO1HQ8N1T3 1032 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 KAT2BQ92831 832 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 PHKBQ93100 1093 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 ZNF845Q96IR2 970 aaPredicted RBP3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 UNKQ9C0B0 810 aaKnown RBP3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 MYLK2Q9H1R3 596 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 ZBTB26Q9HCK0 441 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 UTS2RQ9UKP6 389 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 EVPLQ92817 2033 aa3.59□□□□□ -1.83
LAPTM4A-202ENST00000483117 KIR2DS5A0A0G2JLQ3 304 aa3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 H0YGN5 161 aa3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 KIR2DS3K7RE56 304 aa3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 ZSCAN9O15535 394 aaPredicted RBP3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 PRPF4O43172 522 aaKnown RBP eCLIP3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 EIF3JO75822 258 aaKnown RBP3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 PARNO95453 639 aaKnown RBP3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 ENO1P06733 434 aaKnown RBP3.58□□□□□ -1.84
LAPTM4A-202ENST00000483117 TGFB3P10600 412 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms