RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 HLA-EP13747 358 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CD58P19256 250 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 TRIM21P19474 475 aaKnown RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 ACSL1P33121 698 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 PIK3CAP42336 1068 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 AFF3P51826 1226 aaKnown RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 ARID5AQ03989 594 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 INCA1Q0VD86 236 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 STK4Q13043 487 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 EIF4HQ15056 248 aaKnown RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 E2F5Q15329 346 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 TEAD4Q15561 434 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 C1orf220Q5T0J3 134 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CEP135Q66GS9 1140 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 TMEM215Q68D42 235 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CCDC186Q7Z3E2 898 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 SLC9A9Q8IVB4 645 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 GRAMD1CQ8IYS0 662 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 GALNT15Q8N3T1 639 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 RBBP8NLQ8NC74 664 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 OR2T3Q8NH03 318 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 TMC2Q8TDI7 906 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CRELD1Q96HD1 420 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF396Q96N95 335 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CDK5RAP1Q96SZ6 601 aaKnown RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 DUSP16Q9BY84 665 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 SLC2A11Q9BYW1 496 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 MAGEF1Q9HAY2 307 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CYP3A43Q9HB55 503 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 APOBEC3GQ9HC16 384 aaKnown RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 PNPLA8Q9NP80 782 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 MARCH2Q9P0N8 246 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 DKK4Q9UBT3 224 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 ANKRD6Q9Y2G4 727 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 USP3Q9Y6I4 520 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 ITPR1Q14643 2758 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 NBEAQ8NFP9 2946 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 APC2O95996 2303 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 SLC12A8A0AV02 714 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 H0Y8X5 98 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 IKBKBO14920 756 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 TSPAN3O60637 253 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 FSBPO95073 299 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 YEATS4O95619 227 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 NR3C1P04150 777 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 CAMK2GQ13555 558 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 SMAD1Q15797 465 aaKnown RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 PTPRNQ16849 979 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 FOXD4L6Q3SYB3 417 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF394Q53GI3 561 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 KCNT1Q5JUK3 1230 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 PPP1R26Q5T8A7 1209 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 DHRS13Q6UX07 377 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 LAYNQ6UX15 382 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 FOXD4L3Q6VB84 417 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 RSRC2Q7L4I2 434 aaKnown RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 CPXM2Q8N436 756 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF366Q8N895 744 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 PDCD7Q8N8D1 485 aaKnown RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 CYB5D2Q8WUJ1 264 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 BIRC7Q96CA5 298 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 INTS4Q96HW7 963 aaKnown RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 HEXIM2Q96MH2 286 aaKnown RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 BACH2Q9BYV9 841 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 PCED1AQ9H1Q7 454 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 LHX5Q9H2C1 402 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 KCTD10Q9H3F6 313 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 TM9SF3Q9HD45 589 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 STRIP2Q9ULQ0 834 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 PLA2G4CQ9UP65 541 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-206ENST00000483030 ADAMTS20P59510 1910 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 PLXND1Q9Y4D7 1925 aa7.73□□□□□ -1.17
CSDE1-206ENST00000483030 ASXL3Q9C0F0 2248 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 URB1O60287 2271 aaKnown RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 A0A087WV48 116 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 PDXKO00764 312 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 KLRC4O43908 158 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 PCDHGA12O60330 932 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 SEMA4FO95754 770 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 CD27P26842 260 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 GRK6P43250 576 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 GRIA4P48058 902 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 GCLMP48507 274 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 CCT8P50990 548 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 VAMP7P51809 220 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 YWHAGP61981 247 aaKnown RBP eCLIP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 RPS14P62263 151 aaKnown RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 IL9RQ01113 521 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 KMT5BQ4FZB7 885 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 FNDC3BQ53EP0 1204 aaKnown RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 MPPE1Q53F39 396 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 PRAMEF14Q5SWL7 426 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 FOXD4L5Q5VV16 416 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 CHST9Q7L1S5 443 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 ADAT2Q7Z6V5 191 aaKnown RBP7.72□□□□□ -1.17
CSDE1-206ENST00000483030 PIGZQ86VD9 579 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 SCUBE3Q8IX30 993 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 CEP57L1Q8IYX8 460 aa7.72□□□□□ -1.17
CSDE1-206ENST00000483030 ARHGAP18Q8N392 663 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms