RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 CLTCQ00610 1675 aaKnown RBP4.34□□□□□ -1.71
GTF3A-207ENST00000482655 ITSN2Q9NZM3 1697 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 SUPT6HQ7KZ85 1726 aaKnown RBP4.33□□□□□ -1.72
GTF3A-207ENST00000482655 PLXNC1O60486 1568 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 LRRC7Q96NW7 1537 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 FGBP02675 491 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 ADRA1DP25100 572 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 RBL1P28749 1068 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 NTSR1P30989 418 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 EIF4A1P60842 406 aaKnown RBP4.33□□□□□ -1.72
GTF3A-207ENST00000482655 CFHR3Q02985 330 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 KCNAB1Q14722 419 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 FAM209BQ5JX69 171 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 MEX3CQ5U5Q3 659 aaKnown RBP4.33□□□□□ -1.72
GTF3A-207ENST00000482655 PLAG1Q6DJT9 500 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 SHC4Q6S5L8 630 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 CLEC9AQ6UXN8 241 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 RANBP10Q6VN20 620 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 MRPL10Q7Z7H8 261 aaKnown RBP4.33□□□□□ -1.72
GTF3A-207ENST00000482655 FSTL5Q8N475 847 aaPredicted RBP4.33□□□□□ -1.72
GTF3A-207ENST00000482655 PNPLA1Q8N8W4 532 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 ANKRD42Q8N9B4 389 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 POF1BQ8WVV4 589 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 BRI3BPQ8WY22 251 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 ZBTB9Q96C00 473 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 SNX22Q96L94 193 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 TMEM79Q9BSE2 394 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 HERPUD2Q9BSE4 406 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 USP29Q9HBJ7 922 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 DKK4Q9UBT3 224 aa4.33□□□□□ -1.72
GTF3A-207ENST00000482655 POLR1AO95602 1720 aaPredicted RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 CPS1P31327 1500 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 hCG_1642624A0A1W2PR95 340 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 F8W8V4 182 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 H3BNC9 293 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 AGPSO00116 658 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 FCHO1O14526 889 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 APOL1O14791 398 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 NPHP1O15259 732 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 MT-ND5P03915 603 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 BTF3P20290 206 aaKnown RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 YY1P25490 414 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 TECP42680 631 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 PPM1FP49593 454 aaPredicted RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 TNFAIP2Q03169 654 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 LAMB3Q13751 1172 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 RAPGEF1Q13905 1077 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 MFSD13AQ14CX5 517 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 USP49Q70CQ1 688 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 RNF44Q7L0R7 432 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 SKAP1Q86WV1 359 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 LIX1LQ8IVB5 337 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 P3H2Q8IVL5 708 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 METTL25Q8N6Q8 603 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 C12orf76Q8N812 135 aaPredicted RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 PNISRQ8TF01 805 aaKnown RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 CCT6BQ92526 530 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 IQCDQ96DY2 449 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 LTV1Q96GA3 475 aaPredicted RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 HIC2Q96JB3 615 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 SCLT1Q96NL6 688 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 CINPQ9BW66 212 aaPredicted RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 COLEC11Q9BWP8 271 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 BRIP1Q9BX63 1249 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 TBC1D23Q9NUY8 699 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 FNIP2Q9P278 1114 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 MAGED2Q9UNF1 606 aaPredicted RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 HPSEQ9Y251 543 aa4.32□□□□□ -1.72
GTF3A-207ENST00000482655 ZC3H13Q5T200 1668 aaKnown RBP4.32□□□□□ -1.72
GTF3A-207ENST00000482655 SAMD9LQ8IVG5 1584 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.31□□□□□ -1.72
GTF3A-207ENST00000482655 CLIC1O00299 241 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 SOCS2O14508 198 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 THAP12O43422 761 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 TMEM225BP0DP42 221 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 ITGB6P18564 788 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 ABCB4P21439 1286 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 MCM5P33992 734 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 PPM1AP35813 382 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 NR4A2P43354 598 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 ZNF91Q05481 1191 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 TRIM14Q14142 442 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 CLCA4Q14CN2 919 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 INO80DQ53TQ3 878 aaPredicted RBP4.31□□□□□ -1.72
GTF3A-207ENST00000482655 TMTC4Q5T4D3 741 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 ERAP2Q6P179 960 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 PGBD2Q6P3X8 592 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 BEND5Q7L4P6 421 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 KRT73Q86Y46 540 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 SYTL1Q8IYJ3 562 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 FAM71DQ8N9W8 422 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 ZNF398Q8TD17 642 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 MAP4K1Q92918 833 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 EDC3Q96F86 508 aaKnown RBP4.31□□□□□ -1.72
GTF3A-207ENST00000482655 ZDHHC12Q96GR4 267 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 CRB3Q9BUF7 120 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
GTF3A-207ENST00000482655 GAR1Q9NY12 217 aaKnown RBP4.31□□□□□ -1.72
GTF3A-207ENST00000482655 SLC27A6Q9Y2P4 619 aa4.31□□□□□ -1.72
GTF3A-207ENST00000482655 AFG3L2Q9Y4W6 797 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms