RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 RRN3Q9NYV6 651 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 PISDQ9UG56 409 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 RCAN3Q9UKA8 241 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 ANK2Q01484 3957 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 FAM47DPA6NHR8 397 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 TLR4O00206 839 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 IFIT3O14879 490 aaKnown RBP6.91□□□□□ -1.3
CHD6-209ENST00000482596 NVLO15381 856 aaKnown RBP6.91□□□□□ -1.3
CHD6-209ENST00000482596 NKX2-8O15522 239 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 HOXC11O43248 304 aaPredicted RBP6.91□□□□□ -1.3
CHD6-209ENST00000482596 HMMRO75330 724 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 PSMD10O75832 226 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 CSH1P0DML2 217 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 CSH2P0DML3 217 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 PRKAR1AP10644 381 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 LIFP15018 202 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 ITIH1P19827 911 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 KLK2P20151 261 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 DGKAP23743 735 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 MSX1P28360 303 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 PTGER4P35408 488 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 PLA2G4AP47712 749 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 LEPRP48357 1165 aaKnown RBP6.91□□□□□ -1.3
CHD6-209ENST00000482596 OSTNP61366 133 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 PSMC5P62195 406 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 NMIQ13287 307 aaPredicted RBP6.91□□□□□ -1.3
CHD6-209ENST00000482596 ANO4Q32M45 955 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 XKR4Q5GH76 650 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 BTBD8Q5XKL5 378 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 TMEM198Q66K66 360 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 KIAA0895LQ68EN5 471 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 ARMCX5Q6P1M9 558 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 GUSBP11Q6P575 273 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 RAB11FIP2Q7L804 512 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 ADGRF2Q8IZF7 708 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 SKA1Q96BD8 255 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 RIT2Q99578 217 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 SMR3AQ99954 134 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 NFKBIZQ9BYH8 718 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 BTBD1Q9H0C5 482 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 ERVMER34-1Q9H9K5 563 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 EPB41L5Q9HCM4 733 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 CFAP97Q9P2B7 532 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 TUBGCP4Q9UGJ1 667 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 CPQQ9Y646 472 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 TLN2Q9Y4G6 2542 aa6.91□□□□□ -1.3
CHD6-209ENST00000482596 CPED1A4D0V7 1026 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 SMCO2A6NFE2 343 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 A6NJY4 79 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 EML1O00423 815 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 CDK2AP1O14519 115 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 SLC9A3R1O14745 358 aaPredicted RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 GRID2O43424 1007 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 ATP9BO43861 1147 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 CNTN5O94779 1100 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 NOL4O94818 638 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 LIG1P18858 919 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 RXRAP19793 462 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 ARL2P36404 184 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 ETV5P41161 510 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 KCNJ12Q14500 433 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 SAFBQ15424 915 aaKnown RBP eCLIP6.9□□□□□ -1.3
CHD6-209ENST00000482596 INPP5JQ15735 1006 aaPredicted RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 CDKN3Q16667 212 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 DDR2Q16832 855 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 DEFB109BQ30KR1 87 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 NADK2Q4G0N4 442 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 PERM1Q5SV97 790 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 ZNF385CQ66K41 422 aaPredicted RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 NUGGCQ68CJ6 796 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 TGIF2LYQ8IUE0 185 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 RDM1Q8NG50 284 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 CTCFLQ8NI51 663 aaPredicted RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 PANK1Q8TE04 598 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 APOBEC4Q8WW27 367 aaKnown RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 NDRG1Q92597 394 aaKnown RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 NAP1L5Q96NT1 182 aaPredicted RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 CATSPER2Q96P56 530 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 UCN2Q96RP3 112 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 ADPGKQ9BRR6 497 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 ZCWPW1Q9H0M4 648 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 LHX5Q9H2C1 402 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 CHMP4BQ9H444 224 aaKnown RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 SLC38A7Q9NVC3 462 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 TMLHEQ9NVH6 421 aa6.9□□□□□ -1.3
CHD6-209ENST00000482596 PRMT7Q9NVM4 692 aaPredicted RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 RPH3AQ9Y2J0 694 aaPredicted RBP6.9□□□□□ -1.3
CHD6-209ENST00000482596 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.89□□□□□ -1.31
CHD6-209ENST00000482596 FAM221AA4D161 298 aa6.89□□□□□ -1.31
CHD6-209ENST00000482596 LRRIQ4A6NIV6 560 aa6.89□□□□□ -1.31
CHD6-209ENST00000482596 C9orf172C9J069 976 aa6.89□□□□□ -1.31
CHD6-209ENST00000482596 JAK2O60674 1132 aa6.89□□□□□ -1.31
CHD6-209ENST00000482596 ZG16O60844 167 aa6.89□□□□□ -1.31
CHD6-209ENST00000482596 SORBS2O94875 1100 aaKnown RBP6.89□□□□□ -1.31
CHD6-209ENST00000482596 PRKCHP24723 683 aa6.89□□□□□ -1.31
CHD6-209ENST00000482596 OAS2P29728 719 aaKnown RBP6.89□□□□□ -1.31
CHD6-209ENST00000482596 AARSP49588 968 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD6-209ENST00000482596 ZNF177Q13360 481 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms