RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 NRDE2Q9H7Z3 1164 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 MAD1L1Q9Y6D9 718 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 MKI67P46013 3256 aaKnown RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 F5H423 210 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 NEBLO76041 1014 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 LUC7L3O95232 432 aaKnown RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 MYCP01106 439 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 LINGO3P0C6S8 592 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 CYP2F1P24903 491 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 CCND3P30281 292 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 SLC6A3Q01959 620 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 CMPK2Q5EBM0 449 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 ZCCHC23Q6ZST2 131 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 RFX8Q6ZV50 586 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 TEX9Q8N6V9 391 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 MCUQ8NE86 351 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 DTX3LQ8TDB6 740 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 MCUR1Q96AQ8 359 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 EBNA1BP2Q99848 306 aaKnown RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 SLC4A5Q9BY07 1137 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 MIS12Q9H081 205 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 KCNK4Q9NYG8 393 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 PSMG1O95456 288 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 PGK1P00558 417 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
ATG4B-220ENST00000482507 ENO1P06733 434 aaKnown RBP15.36■□□□□ 0.05
ATG4B-220ENST00000482507 MMP3P08254 477 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 AMPD1P23109 780 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 SDC4P31431 198 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 L1CAMP32004 1257 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 SLC26A2P50443 739 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 RBP5P82980 135 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 SNX30Q5VWJ9 437 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 MFSD14CQ5VZR4 134 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 ADGRF2Q8IZF7 708 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 NDUFAF2Q8N183 169 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 RAET1EQ8TD07 263 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 SLC35F5Q8WV83 523 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 ZNF670Q9BS34 389 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 C16orf70Q9BSU1 422 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 FRMD8Q9BZ67 464 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-220ENST00000482507 MTMR10Q9NXD2 777 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 ZFATQ9P243 1243 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 ITGA11Q9UKX5 1188 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 AKT3Q9Y243 479 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 MYADML2A6NDP7 307 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 MDM4O15151 490 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 FKTNO75072 461 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 GSRP00390 522 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 ACADSP16219 412 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 TMEM110Q86TL2 294 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 GSDMBQ8TAX9 411 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 RNF19AQ9NV58 838 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 MKS1Q9NXB0 559 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 HESX1Q9UBX0 185 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 WASF2Q9Y6W5 498 aa15.36■□□□□ 0.05
ATG4B-220ENST00000482507 DPPA5A6NC42 116 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 B2RBV5 119 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 H3BRJ5 948 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 I3L4J1 428 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 CAPN9O14815 690 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 NVLO15381 856 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 TSPAN1O60635 241 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 SNNO75324 88 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 PRKAR2AP13861 404 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 GCKP35557 465 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 PGM1P36871 562 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 AQP5P55064 265 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 IRX4P78413 519 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 CRADDP78560 199 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 KCNT2Q6UVM3 1135 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 IFNLR1Q8IU57 520 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 NUDCD3Q8IVD9 361 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 NETO2Q8NC67 525 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 RBM15BQ8NDT2 890 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 FAM136AQ96C01 138 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 KIF12Q96FN5 646 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 CLPTM1LQ96KA5 538 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 EBF4Q9BQW3 602 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 BEGAINQ9BUH8 593 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 SLC24A3Q9HC58 644 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 ERAP1Q9NZ08 941 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 STOML1Q9UBI4 398 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 PPARGC1AQ9UBK2 798 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 KIAA1257Q9ULG3 409 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 C2CD2Q9Y426 696 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 H3BRB1 525 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 GCATO75600 419 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 BPGMP07738 259 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 CYBAP13498 195 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 ERFP50548 548 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 MUM1Q2TAK8 710 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 SHKBP1Q8TBC3 707 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 UCMAQ8WVF2 138 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 EMID1Q96A84 441 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 ZNF778Q96MU6 729 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 ZMAT2Q96NC0 199 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 TBCBQ99426 244 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 C11orf84Q9BUA3 381 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms