RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 MTAPQ13126 283 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 SLC25A52Q3SY17 297 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 FYB2Q5VWT5 728 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 SPECC1LQ69YQ0 1117 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 ACAD10Q6JQN1 1059 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 SND1Q7KZF4 910 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC78-212ENST00000482152 RNF214Q8ND24 703 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 DDI1Q8WTU0 396 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 TMA16Q96EY4 203 aaKnown RBP16.98■□□□□ 0.31
CCDC78-212ENST00000482152 PIWIL1Q96J94 861 aaKnown RBP16.98■□□□□ 0.31
CCDC78-212ENST00000482152 NPY6RQ99463 290 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 HAUS4Q9H6D7 363 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 FAM204AQ9H8W3 233 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
CCDC78-212ENST00000482152 DDIT4Q9NX09 232 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 TMEM59LQ9UK28 342 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 SLC27A6Q9Y2P4 619 aa16.98■□□□□ 0.31
CCDC78-212ENST00000482152 F5P12259 2224 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 TBC1D3BA6NDS4 549 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 GFRA2O00451 464 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 GRAP2O75791 330 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 TPM1P09493 284 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 HOXA6P31267 233 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 SLC6A11P48066 632 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 RNASE9P60153 205 aaKnown RBP16.97■□□□□ 0.31
CCDC78-212ENST00000482152 BRMS1LQ5PSV4 323 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 GRAMD4Q6IC98 578 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 SARM1Q6SZW1 724 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 MMS22LQ6ZRQ5 1243 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 VPS36Q86VN1 386 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 DRC7Q8IY82 874 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 NAT16Q8N8M0 369 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 SLC30A5Q8TAD4 765 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 RNF34Q969K3 372 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 ACDQ96AP0 544 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 PRMT8Q9NR22 394 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-212ENST00000482152 DNAJC17Q9NVM6 304 aaKnown RBP16.97■□□□□ 0.31
CCDC78-212ENST00000482152 STARD13Q9Y3M8 1113 aa16.97■□□□□ 0.31
CCDC78-212ENST00000482152 ZNF318Q5VUA4 2279 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 TYW5A2RUC4 315 aaKnown RBP16.96■□□□□ 0.31
CCDC78-212ENST00000482152 KCNU1A8MYU2 1149 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 K7EQS6 105 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 M0QYT0 321 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 TIMM44O43615 452 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 DGKGP49619 791 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 PTP4A2Q12974 167 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 ZC3H12AQ5D1E8 599 aaKnown RBP16.96■□□□□ 0.31
CCDC78-212ENST00000482152 PIK3R6Q5UE93 754 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 TRMT11Q7Z4G4 463 aaKnown RBP16.96■□□□□ 0.31
CCDC78-212ENST00000482152 C12orf40Q86WS4 652 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 PHTF2Q8N3S3 785 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 TERB1Q8NA31 727 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 ADAM32Q8TC27 787 aa16.96■□□□□ 0.31
CCDC78-212ENST00000482152 MIA3Q5JRA6 1907 aa16.96■□□□□ 0.3
CCDC78-212ENST00000482152 COL4A3Q01955 1670 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 SIGLEC16A6NMB1 481 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 GOLGA8SH3BPF8 625 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 NPC1O15118 1278 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 RNF40O75150 1001 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 SERPING1P05155 500 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 CISD3P0C7P0 127 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 KRT3P12035 628 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 GAS6Q14393 721 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 NAIF1Q69YI7 327 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-212ENST00000482152 MON1BQ7L1V2 547 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 SYT13Q7L8C5 426 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 ZNF571Q7Z3V5 609 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-212ENST00000482152 MAML2Q8IZL2 1156 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-212ENST00000482152 C3orf20Q8ND61 904 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 USP33Q8TEY7 942 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 CPLX3Q8WVH0 158 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 C11orf70Q9BRQ4 267 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 WDCPQ9H6R7 721 aa16.95■□□□□ 0.3
CCDC78-212ENST00000482152 ANKRD62A6NC57 917 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 H0Y858 1186 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 ENDOD1O94919 500 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 GYPCP04921 128 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 SP9P0CG40 484 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 DESP17661 470 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 HNRNPH3P31942 346 aaKnown RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 CXCR3P49682 368 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 CSTF1Q05048 431 aaKnown RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 DEUP1Q05D60 604 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 NME3Q13232 169 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 TSR1Q2NL82 804 aaKnown RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 C2CD6Q53TS8 623 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 FAM133BQ5BKY9 247 aaKnown RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 RNF43Q68DV7 783 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 ZC3H14Q6PJT7 736 aaKnown RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 Q6ZS52 159 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 CCDC117Q8IWD4 279 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 MCOLN2Q8IZK6 566 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 CAMKK1Q8N5S9 505 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 HJURPQ8NCD3 748 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 RPLP0P6Q8NHW5 317 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 EZH1Q92800 747 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 ATOH1Q92858 354 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-212ENST00000482152 TRIM11Q96F44 468 aa16.94■□□□□ 0.3
CCDC78-212ENST00000482152 SELENOOQ9BVL4 669 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms