RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 C4orf46Q504U0 113 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 ANKRD40Q6AI12 368 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 TMEM65Q6PI78 240 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 AMIGO2Q86SJ2 522 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 ARHGEF25Q86VW2 580 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 ANKRD18AQ8IVF6 992 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 SCAMP5Q8TAC9 235 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 FYTTD1Q96QD9 318 aaKnown RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 SNX18Q96RF0 628 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 MACROD1Q9BQ69 325 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 PAAF1Q9BRP4 392 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 KLK15Q9H2R5 256 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 VPS45Q9NRW7 570 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 LIN7CQ9NUP9 197 aaKnown RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 SRP68Q9UHB9 627 aaKnown RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 DAPP1Q9UN19 280 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 C19orf53Q9UNZ5 99 aaPredicted RBP4.35□□□□□ -1.71
CBX3-207ENST00000481300 CNTN6Q9UQ52 1028 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 PCDHB7Q9Y5E2 793 aa4.35□□□□□ -1.71
CBX3-207ENST00000481300 CCDC187A0A096LP49 1063 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 TTC34A8MYJ7 566 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 TARM1B6A8C7 271 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 UBE2Q2LH0YL09 131 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 ZNF213O14771 459 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 C1QL1O75973 258 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 MT-CO3P00414 261 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 ITPKBP27987 946 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 CST5P28325 142 aaPredicted RBP4.34□□□□□ -1.71
CBX3-207ENST00000481300 GALNSP34059 522 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 JAK3P52333 1124 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 PNLIPRP1P54315 467 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 GPC5P78333 572 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 RAE1P78406 368 aaKnown RBP4.34□□□□□ -1.71
CBX3-207ENST00000481300 KCNB1Q14721 858 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 MFSD13AQ14CX5 517 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 SUMO4Q6EEV6 95 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 ACSM6Q6P461 480 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 RRAGAQ7L523 313 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 BCDIN3DQ7Z5W3 292 aaKnown RBP4.34□□□□□ -1.71
CBX3-207ENST00000481300 OR52L2PQ8NGH6 319 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 OR6Y1Q8NGX8 325 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 MAFAQ8NHW3 353 aaPredicted RBP4.34□□□□□ -1.71
CBX3-207ENST00000481300 SARAFQ96BY9 339 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 EDC3Q96F86 508 aaKnown RBP4.34□□□□□ -1.71
CBX3-207ENST00000481300 PRR11Q96HE9 360 aaPredicted RBP4.34□□□□□ -1.71
CBX3-207ENST00000481300 ZSCAN31Q96LW9 406 aaPredicted RBP4.34□□□□□ -1.71
CBX3-207ENST00000481300 CCDC17Q96LX7 622 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 ADGRE3Q9BY15 652 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 VPS16Q9H269 839 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 NDUFAF4Q9P032 175 aa4.34□□□□□ -1.71
CBX3-207ENST00000481300 SMARCA4P51532 1647 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 NCAPD3P42695 1498 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.33□□□□□ -1.72
CBX3-207ENST00000481300 GXYLT2A0PJZ3 443 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FAM90A18PA6NE21 464 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FAM90A16PA6NEW6 464 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FAM90A9PA6NNJ1 464 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FAM90A5PA8MXJ8 464 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 H7C1Q1 480 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 PRAMEF2O60811 474 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 C1RP00736 705 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 IGLV2-14P01704 120 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FAM90A15PP0C7V4 464 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FAM90A14PP0C7W9 464 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 APEHP13798 732 aaKnown RBP4.33□□□□□ -1.72
CBX3-207ENST00000481300 DUSP1P28562 367 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 SERPINA4P29622 427 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 AARSP49588 968 aaKnown RBP eCLIP4.33□□□□□ -1.72
CBX3-207ENST00000481300 FAM187BQ17R55 369 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 AAK1Q2M2I8 961 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 VSTM1Q6UX27 236 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 DCDC5Q6ZRR9 648 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 ADAMTS18Q8TE60 1221 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 GLMPQ8WWB7 406 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 THAP4Q8WY91 577 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 NPIPB3Q92617 1050 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 GOLGA1Q92805 767 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 NELL1Q92832 810 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 GCC1Q96CN9 775 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 MCRS1Q96EZ8 462 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 DDX23Q9BUQ8 820 aaKnown RBP4.33□□□□□ -1.72
CBX3-207ENST00000481300 KCNK9Q9NPC2 374 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 ITM2CQ9NQX7 267 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 SEMA4GQ9NTN9 838 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 ABHD10Q9NUJ1 306 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 BAG5Q9UL15 447 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FZD4Q9ULV1 537 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 ZBTB1Q9Y2K1 713 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 FRMD4BQ9Y2L6 1034 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 GPR52Q9Y2T5 361 aa4.33□□□□□ -1.72
CBX3-207ENST00000481300 ARHGEF17Q96PE2 2063 aaPredicted RBP4.33□□□□□ -1.72
CBX3-207ENST00000481300 EIF4G1Q04637 1599 aaKnown RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 BAZ1BQ9UIG0 1483 aaKnown RBP4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3DA0A087WVF3 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3IA0A087WXS9 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3EA0A087X179 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3KA0A087X1G2 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3BA6NDS4 549 aa4.32□□□□□ -1.72
CBX3-207ENST00000481300 TBC1D3FA6NER0 549 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms