RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 ASTLQ6HA08 431 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ALKBH5Q6P6C2 394 aaKnown RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF662Q6ZS27 426 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 FAM183BPQ6ZVS7 135 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 SND1Q7KZF4 910 aaKnown RBP eCLIP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CHST9Q7L1S5 443 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF571Q7Z3V5 609 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TRMT11Q7Z4G4 463 aaKnown RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 METTL3Q86U44 580 aaKnown RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 GAS2L3Q86XJ1 694 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TMTC1Q8IUR5 882 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 RHOT2Q8IXI1 618 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ATP6V0D2Q8N8Y2 350 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TC2NQ8N9U0 490 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CCDC112Q8NEF3 446 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 WFIKKN2Q8TEU8 576 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ACDQ96AP0 544 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 FAM149B1Q96BN6 582 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 FCRL2Q96LA5 508 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 XPO6Q96QU8 1125 aaKnown RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CYP2S1Q96SQ9 504 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 KXD1Q9BQD3 176 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 RPP25Q9BUL9 199 aaKnown RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 PLA2G2FQ9BZM2 168 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 RBSNQ9H1K0 784 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 OSBPL2Q9H1P3 480 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 SEMA4AQ9H3S1 761 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 LTB4R2Q9NPC1 389 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ACP6Q9NPH0 428 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 C11orf16Q9NQ32 467 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ST7Q9NRC1 585 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 GKN1Q9NS71 199 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CFAP97Q9P2B7 532 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ARHGAP20Q9P2F6 1191 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 RCOR3Q9P2K3 495 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 FBXO4Q9UKT5 387 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 PIAS3Q9Y6X2 628 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 NUP205Q92621 2012 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 FAM186AA6NE01 2351 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 OTOGLQ3ZCN5 2332 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 EML5Q05BV3 1969 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 SHROOM3Q8TF72 1996 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 A0A1B0GVM2 712 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 KRBA1A5PL33 1030 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 TCAF2A6NFQ2 919 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 TMEM191CA6NGB0 347 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 TULP1O00294 542 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 DLL1O00548 723 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 ACSL4O60488 711 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF189O75820 626 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 KLKB1P03952 638 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CYP1A2P05177 515 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 ASGR2P07307 311 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CFHP08603 1231 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 H2AFZP0C0S5 128 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 TMEM253P0C7T8 217 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CHRNB1P11230 501 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 ADH5P11766 374 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 LCP1P13796 627 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 GJA1P17302 382 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 ABCB4P21439 1286 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CORO1AP31146 461 aaKnown RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 L1CAMP32004 1257 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CNR2P34972 360 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 RDXP35241 583 aaKnown RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 GRIA2P42262 883 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 HCAR3P49019 387 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 PGFP49763 221 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 RGS7P49802 495 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 TBX4P57082 545 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 SULT2A1Q06520 285 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 EFEMP1Q12805 493 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 GRSF1Q12849 480 aaKnown RBP eCLIP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 SEMA3BQ13214 749 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 FZD5Q13467 585 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 MAMLD1Q13495 774 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 DCAF6Q58WW2 860 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 FAM133BQ5BKY9 247 aaKnown RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 MS4A13Q5J8X5 152 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 RABGAP1LQ5R372 815 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 FAM102AQ5T9C2 384 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 TMCO4Q5TGY1 634 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 PIK3R6Q5UE93 754 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 MANEALQ5VSG8 457 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 LRRC38Q5VT99 294 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 OTUD1Q5VV17 481 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 FYB2Q5VWT5 728 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 SYPL2Q5VXT5 272 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 NAA35Q5VZE5 725 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CWF19L1Q69YN2 538 aaKnown RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 RHBDF2Q6PJF5 856 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 MMS22LQ6ZRQ5 1243 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 H2AFVQ71UI9 128 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 POLNQ7Z5Q5 900 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 SETD3Q86TU7 594 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-223ENST00000480525 TAC4Q86UU9 113 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CCDC105Q8IYK2 499 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 SPEM1Q8N4L4 309 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 CAMKK1Q8N5S9 505 aa5.28□□□□□ -1.56
HDAC6-223ENST00000480525 HJURPQ8NCD3 748 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms