RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 IL4RP24394 825 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 COG7P83436 770 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 RING1Q06587 406 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 PPP2R5EQ16537 467 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 TMC5Q6UXY8 1006 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 TMEM184AQ6ZMB5 413 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 ZNF572Q7Z3I7 529 aaPredicted RBP18.22■□□□□ 0.51
UPF3A-206ENST00000480362 CTAGE6Q86UF2 777 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 CTAGE4Q8IX94 777 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 ARL14EPQ8N8R7 260 aaPredicted RBP18.22■□□□□ 0.51
UPF3A-206ENST00000480362 MAB21L3Q8N8X9 362 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 ATP6V0D2Q8N8Y2 350 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 SHKBP1Q8TBC3 707 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 TCEAL4Q96EI5 215 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 SLC22A12Q96S37 553 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 HAPLN3Q96S86 360 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 KLF16Q9BXK1 252 aaPredicted RBP18.22■□□□□ 0.51
UPF3A-206ENST00000480362 AP1M1Q9BXS5 423 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 MAK16Q9BXY0 300 aaKnown RBP18.22■□□□□ 0.51
UPF3A-206ENST00000480362 OSBPL2Q9H1P3 480 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 SLC12A6Q9UHW9 1150 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 SNX10Q9Y5X0 201 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 OBSL1O75147 1896 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 KRIT1O00522 736 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 MOSPD3O75425 235 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 PAGE1O75459 146 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 PAPLNO95428 1278 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 GLP2RO95838 553 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 OLFM2O95897 454 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 MOCS2O96007 188 aaPredicted RBP18.21■□□□□ 0.51
UPF3A-206ENST00000480362 APOEP02649 317 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 ARL4AP40617 200 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 KCNQ1P51787 676 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 ADCY2Q08462 1091 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 ANKRD20A8PQ5CZ79 823 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 VSIG1Q86XK7 387 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 RFX6Q8HWS3 928 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 ZDHHC14Q8IZN3 488 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 SPATA4Q8NEY3 305 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 MAIP1Q8WWC4 291 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 TSC1Q92574 1164 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 RNF157Q96PX1 679 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 ZNF670Q9BS34 389 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 SLC46A2Q9BY10 475 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 SIK2Q9H0K1 926 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 GKN1Q9NS71 199 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 CWC15Q9P013 229 aaKnown RBP18.21■□□□□ 0.51
UPF3A-206ENST00000480362 XPO7Q9UIA9 1087 aaKnown RBP18.21■□□□□ 0.51
UPF3A-206ENST00000480362 EFR3BQ9Y2G0 817 aa18.21■□□□□ 0.51
UPF3A-206ENST00000480362 FAM72CH0Y354 149 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 ZNF197O14709 1029 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 CREB3O43889 395 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 TJP3O95049 919 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 SRGAP2BP0DMP2 458 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 GOT1P17174 413 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 PFKLP17858 780 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 KLF1Q13351 362 aaPredicted RBP18.2■□□□□ 0.5
UPF3A-206ENST00000480362 ADAM15Q13444 863 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 TEAD2Q15562 447 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 SLC5A9Q2M3M2 681 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 ARHGAP15Q53QZ3 475 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 PRSS36Q5K4E3 855 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 RARS2Q5T160 578 aaKnown RBP18.2■□□□□ 0.5
UPF3A-206ENST00000480362 STXBP5Q5T5C0 1151 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 GPR158Q5T848 1215 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 FAM72AQ5TYM5 149 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 NUGGCQ68CJ6 796 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 FAM72DQ6L9T8 149 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 FAM72BQ86X60 149 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 UNC45BQ8IWX7 931 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 LRRN4CLQ8ND94 238 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 PLD4Q96BZ4 506 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 FAF2Q96CS3 445 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 SMPD4Q9NXE4 827 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 OR12D3Q9UGF7 316 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 NR2E1Q9Y466 385 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 MTCH2Q9Y6C9 303 aa18.2■□□□□ 0.5
UPF3A-206ENST00000480362 DENND4CQ5VZ89 1909 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 CHD9Q3L8U1 2897 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 TRAV19A0A0A6YYK7 116 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 ZNF487B1APH4 448 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 H3BRJ5 948 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 SOX1O00570 391 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-206ENST00000480362 CST8O60676 142 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 STC2O76061 302 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 AMPD1P23109 780 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 DDX6P26196 483 aaKnown RBP eCLIP18.19■□□□□ 0.5
UPF3A-206ENST00000480362 GGCXP38435 758 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 MLLT6P55198 1093 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-206ENST00000480362 C2orf54Q08AI8 447 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 SEMA3BQ13214 749 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 SIX1Q15475 284 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-206ENST00000480362 ANKRD54Q6NXT1 300 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 BBS12Q6ZW61 710 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 PCDH19Q8TAB3 1148 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 BTN2A3PQ96KV6 586 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 CSPG4P5Q96PW8 444 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 APOL5Q9BWW9 433 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 TASP1Q9H6P5 420 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms