RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 BANF1O75531 89 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 KLHL2O95198 593 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 ZSCAN5DPP0CG00 497 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 TCF7P36402 384 aaPredicted RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 YWHAGP61981 247 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHD6-208ENST00000480022 NDUFA5Q16718 116 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 C4orf46Q504U0 113 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 EGFLAMQ63HQ2 1017 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 GPR142Q7Z601 462 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 GPR180Q86V85 440 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 DEFB107AQ8IZN7 70 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 TRIM56Q9BRZ2 755 aaKnown RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 UNKQ9C0B0 810 aaKnown RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 GNPTGQ9UJJ9 305 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 NOCTQ9UK39 431 aaKnown RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 SHOC2Q9UQ13 582 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 SCINQ9Y6U3 715 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 GPR25O00155 361 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 FOXD2O60548 495 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 SIN3BO75182 1162 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 GLRA2P23416 452 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 CTGFP29279 349 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 CCT8P50990 548 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 HSD17B4P51659 736 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 SP3Q02447 781 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 GHRHRQ02643 423 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 NFIL3Q16649 462 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 SLC30A10Q6XR72 485 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 CLVS1Q8IUQ0 354 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 VPS37AQ8NEZ2 397 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 LMO3Q8TAP4 145 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 HSPH1Q92598 858 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 ISOC1Q96CN7 298 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 SERAC1Q96JX3 654 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 KCNK16Q96T55 309 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 EBF4Q9BQW3 602 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 INO80BQ9C086 356 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 PALMDQ9NP74 551 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 MAN1C1Q9NR34 630 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 GID8Q9NWU2 228 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 DKK3Q9UBP4 350 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 EBF1Q9UH73 591 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 CDH7Q9ULB5 785 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 ITM2BQ9Y287 266 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 ZNF701M0R085 212 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 PSMD12O00232 456 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 AQP9O43315 295 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 SULT1C4O75897 302 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 FBXO21O94952 628 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 PCYT1AP49585 367 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 KPNA1P52294 538 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 RPS6P62753 249 aaKnown RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 TUBA4AP68366 448 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 WASHC5Q12768 1159 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 HIF1AQ16665 826 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 RNASEH2BQ5TBB1 312 aaKnown RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 GPR141Q7Z602 305 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 EFCAB3Q8N7B9 438 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 BHMTQ93088 406 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 C12orf43Q96C57 262 aaKnown RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 UIMC1Q96RL1 719 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 MMP19Q99542 508 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 ARHGAP39Q9C0H5 1083 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 GLT8D2Q9H1C3 349 aa11.19□□□□□ -0.62
CHD6-208ENST00000480022 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
CHD6-208ENST00000480022 PFDN6O15212 129 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 DGKIO75912 1065 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 H6PDO95479 791 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 ACAT1P24752 427 aaKnown RBP11.18□□□□□ -0.62
CHD6-208ENST00000480022 GSSP48637 474 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 CAP1Q01518 475 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 FMO1Q01740 532 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 CD300CQ08708 224 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 RGS21Q2M5E4 152 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 ARL13BQ3SXY8 428 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 IL23RQ5VWK5 629 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 PLEKHH3Q7Z736 793 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 TRIM11Q96F44 468 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 ZNF512Q96ME7 567 aaPredicted RBP11.18□□□□□ -0.62
CHD6-208ENST00000480022 SENP7Q9BQF6 1050 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 MECRQ9BV79 373 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 IKZF4Q9H2S9 585 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 HIPK3Q9H422 1215 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 ZNF395Q9H8N7 513 aaPredicted RBP11.18□□□□□ -0.62
CHD6-208ENST00000480022 VTA1Q9NP79 307 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 NCKIPSDQ9NZQ3 722 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 DNM3Q9UQ16 869 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 RBMX2Q9Y388 322 aaKnown RBP11.18□□□□□ -0.62
CHD6-208ENST00000480022 COPEO14579 308 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 KDM1AO60341 852 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 UGT1A9O60656 530 aa11.18□□□□□ -0.62
CHD6-208ENST00000480022 CLASP2O75122 1294 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms