RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZFYVE16Q7Z3T8 1539 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 OR2W5A6NFC9 320 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 KCNAB3O43448 404 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 PIAS2O75928 621 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 GLP2RO95838 553 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 MST1P26927 711 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 PPM1FP49593 454 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 TRIM71Q2Q1W2 868 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 AWAT2Q6E213 333 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 TANGO2Q6ICL3 276 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 GGT6Q6P531 493 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 KIRREL2Q6UWL6 708 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 KCTD20Q7Z5Y7 419 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF354CQ86Y25 554 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 CCDC28AQ8IWP9 274 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 IPO4Q8TEX9 1081 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 HMCESQ96FZ2 354 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZDHHC12Q96GR4 267 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 DPCDQ9BVM2 203 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 PCDHAC1Q9H158 963 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 AS3MTQ9HBK9 375 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 GRHPRQ9UBQ7 328 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZMYND8Q9ULU4 1186 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 GPR52Q9Y2T5 361 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 PCDHGB3Q9Y5G1 929 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 TIAM1Q13009 1591 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 SAMD9LQ8IVG5 1584 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 FANCAO15360 1455 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 ADGRL1O94910 1474 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 MADDQ8WXG6 1647 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 AQP12BA6NM10 295 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 CD3EAPO15446 510 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 USP1O94782 785 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 NTN1O95631 604 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 CSF1RP07333 972 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 NPPBP16860 134 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 ATICP31939 592 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 NR4A2P43354 598 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 ITGA8P53708 1063 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 POU5F1BQ06416 359 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 NSUN2Q08J23 767 aaKnown RBP eCLIP4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 PPFIA1Q13136 1202 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 BIRC3Q13489 604 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 KCNAB1Q14722 419 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 TBC1D25Q3MII6 688 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 CERCAMQ5T4B2 595 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 TMTC4Q5T4D3 741 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 FAXCQ5TGI0 409 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 MANEALQ5VSG8 457 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 CACHD1Q5VU97 1274 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 RAP1GAP2Q684P5 730 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 USP49Q70CQ1 688 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 SLC15A3Q8IY34 581 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 NANOGP1Q8N7R0 232 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 TERB1Q8NA31 727 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 ATG16L2Q8NAA4 619 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 STT3BQ8TCJ2 826 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 PPP2R3CQ969Q6 453 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 KATNAL1Q9BW62 490 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 CIPCQ9C0C6 399 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 LRFN1Q9P244 771 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 PGAP2Q9UHJ9 254 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 VPS51Q9UID3 782 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 HPSEQ9Y251 543 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 DTNAQ9Y4J8 743 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 DIP2CQ9Y2E4 1556 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 MAGI2Q86UL8 1455 aa4.68□□□□□ -1.66
CDC42BPA-212ENST00000478573 PREX1Q8TCU6 1659 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 ARHGAP5Q13017 1502 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 MAP3K1Q13233 1512 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 POGZQ7Z3K3 1410 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 CYP2D7A0A087X1C5 515 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 POC1B-GALNT4F8VUJ3 575 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 UBE2Q2LH0YL09 131 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 PIP5K1BO14986 540 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 SRGAP2O75044 1071 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 COQ9O75208 318 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 RASAL1O95294 804 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 VNN1O95497 513 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 DLDP09622 509 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 DHRS4L1P0CG22 281 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 ARP10275 920 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 PAX3P23760 479 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 ADORA2AP29274 412 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 PDE6CP51160 858 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 PRKAG1P54619 331 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 BCAT1P54687 386 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 POLE2P56282 527 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 TIAL1Q01085 375 aaKnown RBP eCLIP4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 DAZAP2Q15038 168 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 TRIP6Q15654 476 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 ARHGAP15Q53QZ3 475 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 DPY19L3Q6ZPD9 716 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 GATAD2AQ86YP4 633 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 SPARTQ8N0X7 666 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 GALNT4Q8N4A0 578 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 DNAJB14Q8TBM8 379 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 STYXQ8WUJ0 223 aa4.67□□□□□ -1.66
CDC42BPA-212ENST00000478573 OSCP1Q8WVF1 389 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms