RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CCDC134Q9H6E4 229 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 KCNK9Q9NPC2 374 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 SEMA5BQ9P283 1151 aa4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 HEMK1Q9Y5R4 338 aaPredicted RBP4.49□□□□□ -1.69
SMARCA1-204ENST00000478420 LOC105369274A0A096LPK9 316 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 LOC102723532A0A0G2JNH3 316 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 EFCAB8A8MWE9 144 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 NBNO60934 754 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 LARGE1O95461 756 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 CYP2D6P10635 497 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 THBS4P35443 961 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 GRK6P43250 576 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 AP2B1P63010 937 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 AAK1Q2M2I8 961 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 BTBD16Q32M84 506 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 TRIM60Q495X7 471 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 ANO1Q5XXA6 986 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 ANKRD40Q6AI12 368 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 TANGO2Q6ICL3 276 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 SULT6B1Q6IMI4 303 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 LIN54Q6MZP7 749 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 NFRKBQ6P4R8 1299 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 C16orf89Q6UX73 402 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 ZNF813Q6ZN06 617 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 RAB11FIP2Q7L804 512 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 OR4N4Q8N0Y3 316 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 C8orf58Q8NAV2 365 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 OR1N1Q8NGS0 311 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 PNISRQ8TF01 805 aaKnown RBP4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 HMGB4Q8WW32 186 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 DPF1Q92782 380 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 MCRS1Q96EZ8 462 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 C5orf34Q96MH7 638 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 EFHD1Q9BUP0 239 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 NUAK2Q9H093 628 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 BRD8Q9H0E9 1235 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 AGO4Q9HCK5 861 aaKnown RBP4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 PRDM8Q9NQV8 689 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 ARL8BQ9NVJ2 186 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 GRHPRQ9UBQ7 328 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 CNTN6Q9UQ52 1028 aa4.48□□□□□ -1.69
SMARCA1-204ENST00000478420 FAM90A18PA6NE21 464 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 FAM90A16PA6NEW6 464 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 WIPF3A6NGB9 483 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 FAM90A9PA6NNJ1 464 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 FAM90A5PA8MXJ8 464 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 MASP2O00187 686 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 NKX2-8O15522 239 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 PPP6R2O75170 966 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 FAM90A15PP0C7V4 464 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 FAM90A14PP0C7W9 464 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 CERS1P27544 350 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 NDUFS1P28331 727 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 SLC8A1P32418 973 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 VPS41P49754 854 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 AGTR2P50052 363 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 SF3A3Q12874 501 aaKnown RBP eCLIP4.47□□□□□ -1.691e-6■■□□□ 11.9
SMARCA1-204ENST00000478420 FOXF2Q12947 444 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 PRKG1Q13976 671 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 ZNF268Q14587 947 aaPredicted RBP4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 KPNB1Q14974 876 aaKnown RBP4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 KIAA1614Q5VZ46 1190 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 DPY19L2P1Q6NXN4 242 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 WDR93Q6P2C0 686 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 KYAT3Q6YP21 454 aaKnown RBP4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 ZNF66Q6ZN08 573 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 RINLQ6ZS11 566 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 SPATA5Q8NB90 893 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 SCAMP5Q8TAC9 235 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 STT3BQ8TCJ2 826 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 OTUD7AQ8TE49 926 aaPredicted RBP4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 MORC4Q8TE76 937 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 TRAPPC12Q8WVT3 735 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 ELOVL1Q9BW60 279 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 SORBS1Q9BX66 1292 aaKnown RBP4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 SEMA4CQ9C0C4 833 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 MYLK2Q9H1R3 596 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 PPCSQ9HAB8 311 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 ASNSD1Q9NWL6 643 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 FLRT1Q9NZU1 646 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 SIRT4Q9Y6E7 314 aaPredicted RBP4.47□□□□□ -1.69
SMARCA1-204ENST00000478420 M0QYT0 321 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 PRYO14603 147 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 LATS1O95835 1130 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 TUBB4AP04350 444 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 TACR3P29371 465 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 HOXD12P35452 270 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 RNASELQ05823 741 aaKnown RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 GAB1Q13480 694 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 RPS6KA2Q15349 733 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 TIGD6Q17RP2 521 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 FAM110CQ1W6H9 321 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 GLE1Q53GS7 698 aaKnown RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 MIS18BP1Q6P0N0 1132 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 GALNT16Q8N428 558 aa4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 SRFBP1Q8NEF9 429 aaKnown RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 OSR1Q8TAX0 266 aaPredicted RBP4.46□□□□□ -1.7
SMARCA1-204ENST00000478420 ZNF398Q8TD17 642 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms