RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 PDE4CQ08493 712 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 CAMK2GQ13555 558 aaPredicted RBP10.11□□□□□ -0.79
CCM2-210ENST00000478169 TEAD4Q15561 434 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 KMT5BQ4FZB7 885 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 RAB41Q5JT25 222 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 C1orf220Q5T0J3 134 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 PPP1R26Q5T8A7 1209 aaPredicted RBP10.11□□□□□ -0.79
CCM2-210ENST00000478169 RESP18Q5W5W9 173 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 CEP135Q66GS9 1140 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 TMEM215Q68D42 235 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 INTS8Q75QN2 995 aaKnown RBP10.11□□□□□ -0.79
CCM2-210ENST00000478169 RSRC2Q7L4I2 434 aaKnown RBP10.11□□□□□ -0.79
CCM2-210ENST00000478169 DENND1CQ8IV53 801 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 TTC39CQ8N584 583 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 CCDC150Q8NCX0 1101 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 DDI1Q8WTU0 396 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 HNRNPLLQ8WVV9 542 aaKnown RBP10.11□□□□□ -0.79
CCM2-210ENST00000478169 PLD4Q96BZ4 506 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 FAXDC2Q96IV6 333 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 CIPCQ9C0C6 399 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 NIF3L1Q9GZT8 377 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 FBRSQ9HAH7 460 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 APOBEC3GQ9HC16 384 aaKnown RBP10.11□□□□□ -0.79
CCM2-210ENST00000478169 FOXD4L1Q9NU39 408 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 CLEC4EQ9ULY5 219 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 TRAF3IP3Q9Y228 551 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 RAXQ9Y2V3 346 aa10.11□□□□□ -0.79
CCM2-210ENST00000478169 SLC12A8A0AV02 714 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 PCDHGA12O60330 932 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 MYL1P05976 194 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 CD58P19256 250 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 GRIA4P48058 902 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 ME1P48163 572 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 ZNF445P59923 1031 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 ZBTB16Q05516 673 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 NFIL3Q16649 462 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 KIF19Q2TAC6 998 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 MPPE1Q53F39 396 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 ATL3Q6DD88 541 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 FAM124AQ86V42 546 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 GRAMD1CQ8IYS0 662 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 ENGASEQ8NFI3 743 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 TAS1R2Q8TE23 839 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 WFIKKN2Q8TEU8 576 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 SORCS1Q8WY21 1168 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 IGSF8Q969P0 613 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 PAGE5Q96GU1 130 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 HEXIM2Q96MH2 286 aaKnown RBP10.1□□□□□ -0.79
CCM2-210ENST00000478169 LHX5Q9H2C1 402 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 TMEM245Q9H330 911 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 C6orf106Q9H6K1 298 aaPredicted RBP10.1□□□□□ -0.79
CCM2-210ENST00000478169 OLA1Q9NTK5 396 aaKnown RBP10.1□□□□□ -0.79
CCM2-210ENST00000478169 SERTAD1Q9UHV2 236 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 PLA2G4CQ9UP65 541 aa10.1□□□□□ -0.79
CCM2-210ENST00000478169 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.1□□□□□ -0.79
CCM2-210ENST00000478169 GCN1Q92616 2671 aaKnown RBP10.1□□□□□ -0.79
CCM2-210ENST00000478169 MUC22E2RYF6 1773 aaPredicted RBP10.1□□□□□ -0.79
CCM2-210ENST00000478169 COL5A1P20908 1838 aaPredicted RBP10.1□□□□□ -0.79
CCM2-210ENST00000478169 MYLKQ15746 1914 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 LOC400499M0QZD8 3231 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 ARID1BQ8NFD5 2236 aaPredicted RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 TRABD2BA6NFA1 517 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 E9PAM4 449 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 K7ELQ4 463 aaPredicted RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 ACTN4O43707 911 aaKnown RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 DFNA5O60443 496 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 KRT13P13646 458 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 HLA-EP13747 358 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 CD27P26842 260 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 HOXD9P28356 352 aaPredicted RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 ACSL1P33121 698 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 GRK6P43250 576 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 GCLMP48507 274 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 SLC8A3P57103 927 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 MCCD1P59942 119 aaPredicted RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 YWHAGP61981 247 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCM2-210ENST00000478169 PPP3CAQ08209 521 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 TRIP4Q15650 581 aaPredicted RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 PTPRNQ16849 979 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 INAVAQ3KP66 663 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 PM20D1Q6GTS8 502 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 PIGZQ86VD9 579 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 PDCD7Q8N8D1 485 aaKnown RBP10.09□□□□□ -0.79
CCM2-210ENST00000478169 ANKRD52Q8NB46 1076 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 SNX19Q92543 992 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 GOLGA1Q92805 767 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 BTBD1Q9H0C5 482 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 TM9SF3Q9HD45 589 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 USP25Q9UHP3 1055 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 STOML2Q9UJZ1 356 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 CFAP45Q9UL16 551 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCM2-210ENST00000478169 BTBD3Q9Y2F9 522 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 ANKRD6Q9Y2G4 727 aa10.09□□□□□ -0.79
CCM2-210ENST00000478169 SNX11Q9Y5W9 270 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms