RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 FZD9O00144 591 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 GPR25O00155 361 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 SUPT3HO75486 399 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 OAS1P00973 400 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 SLC45A4Q5BKX6 768 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 TTC39BQ5VTQ0 682 aaPredicted RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 MPZL3Q6UWV2 235 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 C10orf107Q8IVU9 208 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 STKLD1Q8NE28 680 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 C18orf25Q96B23 403 aaPredicted RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 WDR83Q9BRX9 315 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 EBF3Q9H4W6 596 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 SENP1Q9P0U3 644 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 MTO1Q9Y2Z2 717 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 ATP6AP2A0A1C7CYW4 349 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 C2CD2LO14523 706 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 CLGNO14967 610 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 BUD23O43709 281 aaKnown RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 ATP6AP2O75787 350 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ARIH2O95376 493 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 RAG1P15918 1043 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ATP6V1C1P21283 382 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ARL4AP40617 200 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 PPP1R26Q5T8A7 1209 aaPredicted RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 MAP1SQ66K74 1059 aaPredicted RBP10.07□□□□□ -0.8
CMC1-209ENST00000477739 UNC5AQ6ZN44 842 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ASRGL1Q7L266 308 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 CATSPER4Q7RTX7 472 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 RIOX2Q8IUF8 465 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.07□□□□□ -0.8
CMC1-209ENST00000477739 DPEP3Q9H4B8 488 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 BATF3Q9NR55 127 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 ANGPTL2Q9UKU9 493 aa10.07□□□□□ -0.8
CMC1-209ENST00000477739 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 CCL22O00626 93 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 TYROBPO43914 113 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 TGFB3P10600 412 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 P4HA1P13674 534 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 ICAM3P32942 547 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 YWHAZP63104 245 aaKnown RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 PITX1P78337 314 aaPredicted RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 TFDP2Q14188 446 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 PPM1LQ5SGD2 360 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 PMF1Q6P1K2 205 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 PCDH20Q8N6Y1 951 aaKnown RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 C1orf127Q8N9H9 656 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 TTC13Q8NBP0 860 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 DCAKDQ8WVC6 231 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 TMEM109Q9BVC6 243 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 TASP1Q9H6P5 420 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 SNTG2Q9NY99 539 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 SLC7A8Q9UHI5 535 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 COMMD10Q9Y6G5 202 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 SRRM3A6NNA2 597 aaPredicted RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 MSCO60682 206 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 CD1EP15812 388 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 PSMB4P28070 264 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 RIPK1Q13546 671 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 TTLL4Q14679 1199 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 OASLQ15646 514 aaKnown RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 LCA5Q86VQ0 697 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 BANPQ8N9N5 519 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 NLGN2Q8NFZ4 835 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 OR52K1Q8NGK4 314 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 CDKL2Q92772 493 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 TMEM176AQ96HP8 235 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 SMARCAD1Q9H4L7 1026 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 C20orf96Q9NUD7 363 aaPredicted RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 SLC24A2Q9UI40 661 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 ADAMTS5Q9UNA0 930 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 SNCAIPQ9Y6H5 919 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 ANPEPP15144 967 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 MRPS35P82673 323 aaKnown RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 TMEM132DQ14C87 1099 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 RIBC1Q8N443 379 aaPredicted RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 AGAP2Q99490 1192 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 ZNF184Q99676 751 aaPredicted RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 GRIP2Q9C0E4 1043 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 COPS7BQ9H9Q2 264 aaPredicted RBP10.06□□□□□ -0.8
CMC1-209ENST00000477739 STYXL1Q9Y6J8 313 aa10.06□□□□□ -0.8
CMC1-209ENST00000477739 KNL1Q8NG31 2342 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 DFFAO00273 331 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 PPP1R12AO14974 1030 aaPredicted RBP10.05□□□□□ -0.8
CMC1-209ENST00000477739 PFDN1O60925 122 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 SLC1A6P48664 564 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 DSG1Q02413 1049 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 ART3Q13508 389 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 EXOC8Q8IYI6 725 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 COLGALT1Q8NBJ5 622 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 LENG1Q96BZ8 264 aaPredicted RBP10.05□□□□□ -0.8
CMC1-209ENST00000477739 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 CDT1Q9H211 546 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 RSAD1Q9HA92 442 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 LGALS13Q9UHV8 139 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 APOC4-APOC2K7ER74 178 aa10.05□□□□□ -0.8
CMC1-209ENST00000477739 ACKR2O00590 384 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms