RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 BOLLQ8N9W6 283 aaKnown RBP4.31□□□□□ -1.72
RPL39-203ENST00000477403 USP38Q8NB14 1042 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 TMIEQ8NEW7 156 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 GJA10Q969M2 543 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 KAZALD1Q96I82 304 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 SUCLG2Q96I99 432 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 DMRTA2Q96SC8 542 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 DHX36Q9H2U1 1008 aaKnown RBP4.31□□□□□ -1.72
RPL39-203ENST00000477403 TXNRD2Q9NNW7 524 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 PLCB1Q9NQ66 1216 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 ANLNQ9NQW6 1124 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 CALCOCO1Q9P1Z2 691 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 PI4KBQ9UBF8 816 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 PNMA8BQ9ULN7 279 aaPredicted RBP4.31□□□□□ -1.72
RPL39-203ENST00000477403 PHTF1Q9UMS5 762 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 FAM50BQ9Y247 325 aa4.31□□□□□ -1.72
RPL39-203ENST00000477403 ECM29Q5VYK3 1845 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 PDS5AQ29RF7 1337 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 EYSQ5T1H1 3165 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 PRAMEF33A0A0G2JMD5 474 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 A0A1W2PS29 197 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 TRIM43BA6NCK2 446 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 TOR1BO14657 336 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 MGST3O14880 152 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 SEPT4O43236 478 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 PRAMEF10O60809 474 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 NBNO60934 754 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 CLTBP09497 229 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 PF4V1P10720 104 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 LPOP22079 712 aaPredicted RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 PPM1FP49593 454 aaPredicted RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 RARRES1P49788 294 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 ADKP55263 362 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 RPS7P62081 194 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 GSTO1P78417 241 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 MRPS21P82921 87 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 CCDC142Q17RM4 750 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 TRIM60Q495X7 471 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 TMEM31Q5JXX7 168 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 SP5Q6BEB4 398 aaPredicted RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 TTC7BQ86TV6 843 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 DZIP1Q86YF9 867 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 WDR63Q8IWG1 891 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 MIER2Q8N344 545 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 PDILTQ8N807 584 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 PDPRQ8NCN5 879 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 C1orf131Q8NDD1 294 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 TRIM43Q96BQ3 446 aaPredicted RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 LRFN3Q9BTN0 628 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 PORCNQ9H237 461 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 BICC1Q9H694 974 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 DDX4Q9NQI0 724 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 MAN1C1Q9NR34 630 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 INTS13Q9NVM9 706 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 VSX1Q9NZR4 365 aaPredicted RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 CTTNBP2NLQ9P2B4 639 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 CFAP20Q9Y6A4 193 aaKnown RBP4.3□□□□□ -1.72
RPL39-203ENST00000477403 OTOFQ9HC10 1997 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 ZSWIM8A7E2V4 1837 aa4.3□□□□□ -1.72
RPL39-203ENST00000477403 ARAP2Q8WZ64 1704 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 RFX7Q2KHR2 1363 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 MROH7-TTC4A0A0A0MT08 1334 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 FRMPD2Q68DX3 1309 aaPredicted RBP4.29□□□□□ -1.72
RPL39-203ENST00000477403 DNAH12Q6ZR08 3092 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 CCDC195A0A1B0GUA6 201 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 PRRT4C9JH25 899 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 ERC2O15083 957 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 PMM2O15305 246 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 YY2O15391 372 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 CIAO1O76071 339 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 TIMP1P01033 207 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 CYBAP13498 195 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 MALP21145 153 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 GATA3P23771 443 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 CYP2C19P33261 490 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 BTDP43251 543 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 RECQLP46063 649 aaPredicted RBP4.29□□□□□ -1.72
RPL39-203ENST00000477403 ELLP55199 621 aaPredicted RBP4.29□□□□□ -1.72
RPL39-203ENST00000477403 PIGFQ07326 219 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 STK3Q13188 491 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 PPIGQ13427 754 aaKnown RBP eCLIP4.29□□□□□ -1.72
RPL39-203ENST00000477403 GRB14Q14449 540 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 KCTD2Q14681 263 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 KRT72Q14CN4 511 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 RAB30Q15771 203 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 TMEM240Q5SV17 173 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 L1TD1Q5T7N2 865 aaKnown RBP4.29□□□□□ -1.72
RPL39-203ENST00000477403 SYCE2Q6PIF2 218 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 ATF7IPQ6VMQ6 1270 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 ANKRD33Q7Z3H0 272 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 DPP9Q86TI2 863 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 ABRAQ8N0Z2 381 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 CFAP52Q8N1V2 620 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 CPA6Q8N4T0 437 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 ANKRD44Q8N8A2 993 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 SLC44A5Q8NCS7 719 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
RPL39-203ENST00000477403 SLC30A5Q8TAD4 765 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms