RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
COPS3-207ENST00000477299 TRIM62Q9BVG3 475 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 SLC2A4RGQ9NR83 387 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 STAP1Q9ULZ2 295 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 F5P12259 2224 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 KRBA1A5PL33 1030 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 TMEM253P0C7T8 217 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 TCF4P15884 667 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 CD72P21854 359 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 GBP1P32455 592 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 CYLC1P35663 651 aaPredicted RBP16.49■□□□□ 0.23
COPS3-207ENST00000477299 ZNF143P52747 638 aaPredicted RBP16.49■□□□□ 0.23
COPS3-207ENST00000477299 RING1Q06587 406 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 RUNX3Q13761 415 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 DHCR24Q15392 516 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 SLC44A4Q53GD3 710 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 FAM133BQ5BKY9 247 aaKnown RBP16.49■□□□□ 0.23
COPS3-207ENST00000477299 ARTNQ5T4W7 220 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 C14orf80Q86SX3 495 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 CCDC185Q8N715 623 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 IRF7Q92985 503 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 BHMTQ93088 406 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 RNF34Q969K3 372 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 TRIM11Q96F44 468 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 PGAP3Q96FM1 320 aaPredicted RBP16.49■□□□□ 0.23
COPS3-207ENST00000477299 LACRTQ9GZZ8 138 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 EPHX3Q9H6B9 360 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 ECT2Q9H8V3 914 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 PLK2Q9NYY3 685 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 CTTNBP2NLQ9P2B4 639 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 SALL4Q9UJQ4 1053 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 LSM7Q9UK45 103 aaKnown RBP16.49■□□□□ 0.23
COPS3-207ENST00000477299 DUSP10Q9Y6W6 482 aa16.49■□□□□ 0.23
COPS3-207ENST00000477299 ANTXRLA6NF34 631 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 ACSL4O60488 711 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 PAGE1O75459 146 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 PDGFBP01127 241 aaPredicted RBP16.48■□□□□ 0.23
COPS3-207ENST00000477299 PSMA2P25787 234 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 SLC6A11P48066 632 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 HARS2P49590 506 aaKnown RBP16.48■□□□□ 0.23
COPS3-207ENST00000477299 IRAK1P51617 712 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 MESP2Q0VG99 397 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 NNTQ13423 1086 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 PIK3R6Q5UE93 754 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 TXNDC11Q6PKC3 985 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 C12orf40Q86WS4 652 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 SLC35G2Q8TBE7 412 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 ZNF564Q8TBZ8 553 aaPredicted RBP16.48■□□□□ 0.23
COPS3-207ENST00000477299 CTNNBL1Q8WYA6 563 aaPredicted RBP16.48■□□□□ 0.23
COPS3-207ENST00000477299 PEBP4Q96S96 227 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 CNPY3Q9BT09 278 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 DCLK3Q9C098 648 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 TKTL2Q9H0I9 626 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 FBRSL1Q9HCM7 1045 aaKnown RBP16.48■□□□□ 0.23
COPS3-207ENST00000477299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.48■□□□□ 0.23
COPS3-207ENST00000477299 RRN3Q9NYV6 651 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 ANAPC7Q9UJX3 599 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 CLEC4EQ9ULY5 219 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 SCINQ9Y6U3 715 aa16.48■□□□□ 0.23
COPS3-207ENST00000477299 KIAA1549LQ6ZVL6 1849 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 GFRA2O00451 464 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 TRIM24O15164 1050 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 DCXO43602 365 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 GJA4P35212 333 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 KPNA1P52294 538 aaPredicted RBP16.47■□□□□ 0.23
COPS3-207ENST00000477299 PPP2R5DQ14738 602 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 PDGFRLQ15198 375 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 ITPRIPL2Q3MIP1 535 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 RAP1GAP2Q684P5 730 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 SCYL2Q6P3W7 929 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 UNC45BQ8IWX7 931 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 FAM217AQ8IXS0 508 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 CFAP52Q8N1V2 620 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 NAT16Q8N8M0 369 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 CSGALNACT1Q8TDX6 532 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 EDAQ92838 391 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 SIK2Q9H0K1 926 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 KCNF1Q9H3M0 494 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 WDCPQ9H6R7 721 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 MRPL47Q9HD33 250 aaKnown RBP16.47■□□□□ 0.23
COPS3-207ENST00000477299 SPHK2Q9NRA0 654 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 GPATCH2LQ9NWQ4 482 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 ARHGEF38Q9NXL2 777 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 PCSK1NQ9UHG2 260 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 STOML2Q9UJZ1 356 aa16.47■□□□□ 0.23
COPS3-207ENST00000477299 MYO18AQ92614 2054 aaKnown RBP16.47■□□□□ 0.23
COPS3-207ENST00000477299 TMEM110-MUSTN1A8MSY1 372 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 SLC9A3R1O14745 358 aaPredicted RBP16.46■□□□□ 0.23
COPS3-207ENST00000477299 APOEP02649 317 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 CCR1P32246 355 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 RDXP35241 583 aaKnown RBP16.46■□□□□ 0.23
COPS3-207ENST00000477299 SPA17Q15506 151 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 ANO4Q32M45 955 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 MS4A13Q5J8X5 152 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 ADGRF1Q5T601 910 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 NUGGCQ68CJ6 796 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 TXNRD3NBQ6F5E7 133 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 CYP4V2Q6ZWL3 525 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms