RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RIMS3Q9UJD0 308 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 KANSL1LA0AUZ9 987 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 SERPINE1P05121 402 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 PCSK6P29122 969 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 MAGEA10P43363 369 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 TEDDM1Q5T9Z0 273 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 MBLAC2Q68D91 279 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 C16orf89Q6UX73 402 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 SNRNP27Q8WVK2 155 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 CFAP36Q96G28 342 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 APOL6Q9BWW8 343 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 KLC2Q9H0B6 622 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 ACAD9Q9H845 621 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 CYP4F11Q9HBI6 524 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 NMRK2Q9NPI5 230 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 ANKEF1Q9NU02 776 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 COL20A1Q9P218 1284 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 BARX2Q9UMQ3 279 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 WDR81Q562E7 1941 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 GLRA3O75311 464 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 TOM1L1O75674 476 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 CELF2O95319 508 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 VARSP26640 1264 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 YWHABP31946 246 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 ALDH3B2P48448 385 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 YWHAZP63104 245 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 ROR1Q01973 937 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 CNTN2Q02246 1040 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 MPP3Q13368 585 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 PDAP1Q13442 181 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 TCHHL1Q5QJ38 904 aaPredicted RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 RWDD4Q6NW29 188 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 POTEHQ6S545 545 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 TMEM270Q6UE05 265 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 LBX2Q6XYB7 198 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 UNC45BQ8IWX7 931 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 C4orf19Q8IY42 314 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 NDUFAF2Q8N183 169 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 MPHOSPH6Q99547 160 aaKnown RBP15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 SLC13A1Q9BZW2 595 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 C20orf27Q9GZN8 174 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 IFT122Q9HBG6 1241 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 POPDC2Q9HBU9 364 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 PAK5Q9P286 719 aa15.71■□□□□ 0.11
CLSTN1-205ENST00000477264 SIP14410 1827 aa15.71■□□□□ 0.1
CLSTN1-205ENST00000477264 ZNF701M0R085 212 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ITM2AO43736 263 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 APOEP02649 317 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 COX4I1P13073 169 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 OSBPP22059 807 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 EIF4BP23588 611 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 MLH1P40692 756 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 SLC1A6P48664 564 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 DYNLT1P63172 113 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 TUBA4AP68366 448 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 SLC25A11Q02978 314 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 CCDC92Q53HC0 331 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 FASTKD1Q53R41 847 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 SYCP2LQ5T4T6 812 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 TXNRD3NBQ6F5E7 133 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 SLC39A4Q6P5W5 647 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 TMEM35BQ8NCS4 154 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 FNIP1Q8TF40 1166 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ZNF778Q96MU6 729 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 RMDN3Q96TC7 470 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 NUF2Q9BZD4 464 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 KMT5AQ9NQR1 393 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ZC3H7BQ9UGR2 993 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 APPL1Q9UKG1 709 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 H0YCG3 227 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 CYB561D2O14569 222 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 EXTL3O43909 919 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 DKC1O60832 514 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 SUPT3HO75486 399 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ZBED1O96006 694 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 CFHP08603 1231 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 PSMC3P17980 439 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 KDELR1P24390 212 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 NPTX2P47972 431 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 IDH3AP50213 366 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 NLRP11P59045 1033 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 OGDHQ02218 1023 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 BAATQ14032 418 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ARHGEF16Q5VV41 709 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 FAM71DQ8N9W8 422 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 HIPK4Q8NE63 616 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 TFB1MQ8WVM0 346 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ITPKCQ96DU7 683 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 TAAR1Q96RJ0 339 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 SLX1AQ9BQ83 275 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 OSBPL6Q9BZF3 934 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 MAF1Q9H063 256 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ZNF395Q9H8N7 513 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 CYP26B1Q9NR63 512 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 ARHGEF38Q9NXL2 777 aa15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 GNEQ9Y223 722 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-205ENST00000477264 KAT6AQ92794 2004 aa15.69■□□□□ 0.1
CLSTN1-205ENST00000477264 FAM159BA6NKW6 160 aa15.69■□□□□ 0.1
CLSTN1-205ENST00000477264 STAM2O75886 525 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms