RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 SLCO1B1Q9Y6L6 691 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 IGF2RP11717 2491 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ASPMQ8IZT6 3477 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 GOLGA6L4A6NEF3 574 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 MEI4A8MW99 385 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 O00370 1275 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 SLC16A3O15427 465 aaKnown RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 SH3BP5O60239 455 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 SYNCRIPO60506 623 aaKnown RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 OPHN1O60890 802 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 CYBBP04839 570 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 NCAM1P13591 858 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 BRD2P25440 801 aaKnown RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 HLA-FP30511 346 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 TPMTP51580 245 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 COPAP53621 1224 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 SLC8A3P57103 927 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 FKBP3Q00688 224 aaKnown RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 BST2Q10589 180 aaKnown RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 KLHL10Q6JEL2 608 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 PMF1Q6P1K2 205 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 TMEM270Q6UE05 265 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 RRAGAQ7L523 313 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 ARHGEF19Q8IW93 802 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 SIX6OS1Q8N1H7 587 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 CHCHD4Q8N4Q1 142 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 ZCCHC9Q8N567 271 aaKnown RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 RBBP8NLQ8NC74 664 aaPredicted RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 WFDC5Q8TCV5 224 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 RNF139Q8WU17 664 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 SMARCE1Q969G3 411 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 PLD4Q96BZ4 506 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 MYEOVQ96EZ4 313 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 MTG2Q9H4K7 406 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 SLC32A1Q9H598 525 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 IL21RQ9HBE5 538 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 ITM2CQ9NQX7 267 aa12.18□□□□□ -0.46
VARS2-208ENST00000477052 WSB2Q9NYS7 404 aaPredicted RBP12.18□□□□□ -0.46
VARS2-208ENST00000477052 CHD6Q8TD26 2715 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 PCNX2A6NKB5 2137 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 BIN1O00499 593 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 VDRP11473 427 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 HOXD12P35452 270 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 FMO5P49326 533 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 HARS2P49590 506 aaKnown RBP12.17□□□□□ -0.46
VARS2-208ENST00000477052 NUMBP49757 651 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 DAOAP59103 153 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 GRIK2Q13002 908 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 ENPP2Q13822 863 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 PKDCCQ504Y2 493 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 FNDC3BQ53EP0 1204 aaKnown RBP12.17□□□□□ -0.46
VARS2-208ENST00000477052 DCAF12L1Q5VU92 463 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 SERPINA13PQ6UXR4 307 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 FAM217AQ8IXS0 508 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 CPXM2Q8N436 756 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 PNPLA1Q8N8W4 532 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 UCMAQ8WVF2 138 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 PRCCQ92733 491 aaPredicted RBP12.17□□□□□ -0.46
VARS2-208ENST00000477052 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 MIS12Q9H081 205 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 ABCB8Q9NUT2 735 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 STIM2Q9P246 746 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 USP36Q9P275 1121 aaKnown RBP12.17□□□□□ -0.46
VARS2-208ENST00000477052 MAN1B1Q9UKM7 699 aa12.17□□□□□ -0.46
VARS2-208ENST00000477052 NUMA1Q14980 2115 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 M0QYV0 167 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 SMC2O95347 1197 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 BMP6P22004 513 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 SLC6A4P31645 630 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 CD70P32970 193 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 DPP6P42658 865 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 STX17P56962 302 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 BNC1Q01954 994 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 ARID5AQ03989 594 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 BECN1Q14457 450 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 CCDC40Q4G0X9 1142 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 MPPE1Q53F39 396 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 SYCP2LQ5T4T6 812 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 LCLAT1Q6UWP7 414 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 LAYNQ6UX15 382 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 CHST9Q7L1S5 443 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 ADIPOR2Q86V24 386 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 PPM1KQ8N3J5 372 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 SPATA20Q8TB22 786 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 ADAM32Q8TC27 787 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 SNX19Q92543 992 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 GATA6Q92908 595 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 FOXJ1Q92949 421 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 TMA16Q96EY4 203 aaKnown RBP12.16□□□□□ -0.46
VARS2-208ENST00000477052 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 FAXDC2Q96IV6 333 aa12.16□□□□□ -0.46
VARS2-208ENST00000477052 OLA1Q9NTK5 396 aaKnown RBP12.16□□□□□ -0.46
VARS2-208ENST00000477052 EIF2B4Q9UI10 523 aaKnown RBP12.16□□□□□ -0.46
VARS2-208ENST00000477052 HBS1LQ9Y450 684 aaKnown RBP12.16□□□□□ -0.46
VARS2-208ENST00000477052 SPEGQ15772 3267 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 ZZEF1O43149 2961 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 TBL1XO60907 577 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms