RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 NAGPAQ9UK23 515 aa11.93□□□□□ -0.5
BRCA1-213ENST00000476777 AGO1Q9UL18 857 aaKnown RBP11.93□□□□□ -0.5
BRCA1-213ENST00000476777 A0A1B0GTQ1 180 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 LRRIQ3A6PVS8 624 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 CBX4O00257 560 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 RRP8O43159 456 aaKnown RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 DFNA5O60443 496 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 CLSTN1O94985 981 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 FSBPO95073 299 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 C4BPAP04003 597 aaKnown RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 HNF1BP35680 557 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 PSEN1P49768 467 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 KIF11P52732 1056 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 AP3M2P53677 418 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 CLDN10P78369 228 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 COG7P83436 770 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 RTP5Q14D33 572 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 FAM26FQ5R3K3 315 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 PCSK4Q6UW60 755 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 UNC93AQ86WB7 457 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 NELFCDQ8IXH7 590 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 C12orf56Q8IXR9 622 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 SNIP1Q8TAD8 396 aaKnown RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 SLC2A11Q9BYW1 496 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 DCLK3Q9C098 648 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 NRSN2Q9GZP1 204 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 BTBD1Q9H0C5 482 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 PNPLA8Q9NP80 782 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
BRCA1-213ENST00000476777 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 COL5A1P20908 1838 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
BRCA1-213ENST00000476777 UBE4BO95155 1302 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 BOD1L1Q8NFC6 3051 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 TP53BP1Q12888 1972 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-213ENST00000476777 TEX51A0A1B0GUA7 166 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ENC1O14682 589 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CAPN9O14815 690 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 VILLO15195 856 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 EXOC3O60645 756 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 RFPL3O75679 317 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CYBBP04839 570 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 IGHV4-34P06331 123 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 HMBSP08397 361 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 C1SP09871 688 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 RALAP11233 206 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CDK4P11802 303 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 P4HA1P13674 534 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ASPAP45381 313 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 BCAT1P54687 386 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 RPS14P62263 151 aaKnown RBP11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ASIC1P78348 528 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ARID5AQ03989 594 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ZBTB16Q05516 673 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 EFEMP1Q12805 493 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 TARDBPQ13148 414 aaKnown RBP eCLIP11.91□□□□□ -0.5
BRCA1-213ENST00000476777 DNAJC3Q13217 504 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 E2F4Q16254 413 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 PRAMEF14Q5SWL7 426 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 HES3Q5TGS1 186 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 FAM173BQ6P4H8 233 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CNNM4Q6P4Q7 775 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CCDC186Q7Z3E2 898 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 GPR155Q7Z3F1 870 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ADAT2Q7Z6V5 191 aaKnown RBP11.91□□□□□ -0.5
BRCA1-213ENST00000476777 GATAD2AQ86YP4 633 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 DENND1CQ8IV53 801 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 FAM217AQ8IXS0 508 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CPXM2Q8N436 756 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ZNF366Q8N895 744 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 PARD3BQ8TEW8 1205 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 DDI1Q8WTU0 396 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CYB5D2Q8WUJ1 264 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 BAP1Q92560 729 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 TWNKQ96RR1 684 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CDK5RAP1Q96SZ6 601 aaKnown RBP11.91□□□□□ -0.5
BRCA1-213ENST00000476777 LRRC27Q9C0I9 530 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 PRSS16Q9NQE7 514 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 CLIC5Q9NZA1 410 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 RASAL2Q9UJF2 1139 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-213ENST00000476777 USP3Q9Y6I4 520 aa11.91□□□□□ -0.5
BRCA1-213ENST00000476777 VPS37CA5D8V6 355 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 J3QKU1 62 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 LDOC1O95751 146 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 HOXD9P28356 352 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 HLA-FP30511 346 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 ACADVLP49748 655 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 C21orf59P57076 290 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 RACK1P63244 317 aaKnown RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 EHHADHQ08426 723 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 SLC39A14Q15043 492 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 SHBQ15464 509 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 SGSM1Q2NKQ1 1148 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 FNDC3BQ53EP0 1204 aaKnown RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 SPOPLQ6IQ16 392 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 FBXL19Q6PCT2 694 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 SAP25Q8TEE9 199 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms