RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ADIGQ0VDE8 80 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CTBP1Q13363 440 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 DPYSL3Q14195 570 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 LBX2Q6XYB7 198 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CDHR3Q6ZTQ4 885 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 C11orf74Q86VG3 221 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MAP4K3Q8IVH8 894 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SCUBE1Q8IWY4 988 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 RASGEF1CQ8N431 466 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MTMR14Q8NCE2 650 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 STK32AQ8WU08 396 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SEPT1Q8WYJ6 367 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CPT1BQ92523 772 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 ATP6V1E2Q96A05 226 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 ESAMQ96AP7 390 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 TLCD1Q96CP7 247 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 OXNAD1Q96HP4 312 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 DPEP3Q9H4B8 488 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MINDY3Q9H8M7 445 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 ZFYVE28Q9HCC9 887 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 DDIT4Q9NX09 232 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC167Q9P0B6 97 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 NRXN2Q9P2S2 1712 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 BDP1A6H8Y1 2624 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MCM3APO60318 1980 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 A0A0G2JLL6 359 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 MED7O43513 233 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 VNN1O95497 513 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SNRPAP09012 282 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SUPT20HL2P0C7V6 817 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ITGB6P18564 788 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ATP4AP20648 1035 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PSMB4P28070 264 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CCNFP41002 786 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SLC1A1P43005 524 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CDH13P55290 713 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SP3Q02447 781 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 KLF1Q13351 362 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PPIL2Q13356 520 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ORC2Q13416 577 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ITIH4Q14624 930 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TAF12Q16514 161 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC14Q49A88 953 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ACSBG2Q5FVE4 666 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 C1orf220Q5T0J3 134 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 LDLRAD1Q5T700 205 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ATG16L1Q676U5 607 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF280DQ6N043 979 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PAOXQ6QHF9 649 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 LRRC74BQ6ZQY2 392 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 FAM183BPQ6ZVS7 135 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 FASTKD5Q7L8L6 764 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PRRT2Q7Z6L0 340 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 STRA8Q7Z7C7 330 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 AMIGO2Q86SJ2 522 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CD302Q8IX05 232 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RBM15BQ8NDT2 890 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SLC2A14Q8TDB8 520 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TRIB2Q92519 343 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 LPPQ93052 612 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RPL10LQ96L21 214 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PRPF18Q99633 342 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 APBA2Q99767 749 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 OXCT2Q9BYC2 517 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RHOBTB2Q9BYZ6 727 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 EPB41L4BQ9H329 900 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RERGLQ9H628 205 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CERS4Q9HA82 394 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RNPEPL1Q9HAU8 725 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 GEMIN8Q9NWZ8 242 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PCYOX1Q9UHG3 505 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SNX13Q9Y5W8 968 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 LINC00854A0A1B0GVQ3 168 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 FAM149AA5PLN7 773 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CAPN8A6NHC0 703 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 AKAP10O43572 662 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 HSPA1AP0DMV8 641 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 HSPA1BP0DMV9 641 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 MAPTP10636 758 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RAG1P15918 1043 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CES1P23141 567 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 KDELR1P24390 212 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SMARCA1P28370 1054 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 NDUFV1P49821 464 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 YWHAEP62258 255 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 YWHAHQ04917 246 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 RALGDSQ12967 914 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CSHL1Q14406 222 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 TCEA2Q15560 299 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 CLNKQ7Z7G1 428 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 EFHBQ8N7U6 833 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 GMCL1P1Q8NEA9 526 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ZC3H15Q8WU90 426 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 EME1Q96AY2 570 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 EXOC2Q96KP1 924 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 ZFP42Q96MM3 310 aa5.13□□□□□ -1.59
CCDC39-204ENST00000476379 PARK7Q99497 189 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 SENP6Q9GZR1 1112 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 LIN28AQ9H9Z2 209 aaKnown RBP5.13□□□□□ -1.59
CCDC39-204ENST00000476379 XAB2Q9HCS7 855 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms