RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 DNAJC28Q9NX36 388 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 DNAJC16Q9Y2G8 782 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 PCDHGA8Q9Y5G5 932 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 TEX264Q9Y6I9 313 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 LOC100653049A0A140TA62 436 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 PRSS51A0A1B0GVH4 220 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 A8MU76 341 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 H0YJX3 145 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 AP3B1O00203 1094 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 XPO1O14980 1071 aaKnown RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 TLR3O15455 904 aaKnown RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 KRT34O76011 436 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 BMP10O95393 424 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 MYCP01106 439 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 ZNF26P17031 533 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 IDH3AP50213 366 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 C21orf59P57076 290 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 RPS3AP61247 264 aaKnown RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 RPS8P62241 208 aaKnown RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 CTBSQ01459 385 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 PDPK2PQ6A1A2 396 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 OTOP1Q7RTM1 612 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 CARM1Q86X55 608 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 GRIN3AQ8TCU5 1115 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 PTCD2Q8WV60 388 aaKnown RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 EME1Q96AY2 570 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 PKP2Q99959 881 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 C11orf70Q9BRQ4 267 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 RTKNQ9BST9 563 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 GCOM2Q9BZD3 368 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 EPS15L1Q9UBC2 864 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 GPSM3Q9Y4H4 160 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 COX4I1P13073 169 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 CRHR1P34998 444 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 CDKN2BP42772 138 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 ACADSBP45954 432 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 STAT2P52630 851 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 CTAG1AP78358 180 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 TEDDM1Q5T9Z0 273 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 AGAP9Q5VTM2 703 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 TMEM102Q8N9M5 508 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 TAS1R2Q8TE23 839 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 C12orf43Q96C57 262 aaKnown RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 VCPIP1Q96JH7 1222 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 ACCSQ96QU6 501 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 HIPK3Q9H422 1215 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 IFT122Q9HBG6 1241 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 TMEM8AQ9HCN3 771 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 OLAHQ9NV23 265 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 FKBP14Q9NWM8 211 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 WRAP73Q9P2S5 460 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 IP6K2Q9UHH9 426 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 POU2F3Q9UKI9 436 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 PRPF19Q9UMS4 504 aaKnown RBP10.87□□□□□ -0.67
ABCF1-205ENST00000475993 SCINQ9Y6U3 715 aa10.87□□□□□ -0.67
ABCF1-205ENST00000475993 LINC00854A0A1B0GVQ3 168 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 AQP9O43315 295 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 ZMPSTE24O75844 475 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 SULT1C4O75897 302 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 GSRP00390 522 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 PTPN2P17706 415 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 PSMC5P62195 406 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 ADAM17P78536 824 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 GCNT1Q02742 428 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 SUZ12Q15022 739 aaKnown RBP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 TJAP1Q5JTD0 557 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 DPP8Q6V1X1 898 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 PHTF2Q8N3S3 785 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 NATD1Q8N6N6 113 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 FBXL13Q8NEE6 735 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 TBC1D15Q8TC07 691 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 HM13Q8TCT9 377 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 CALML6Q8TD86 181 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 ELMO3Q96BJ8 720 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 NACC1Q96RE7 527 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 MMP19Q99542 508 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 ZNF341Q9BYN7 854 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 AS3MTQ9HBK9 375 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 DDX56Q9NY93 547 aaKnown RBP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 MYRFQ9Y2G1 1151 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 MYH9P35579 1960 aaKnown RBP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 C7orf72A4D263 438 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 C6orf229H3BNL8 230 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 PSMD12O00232 456 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 KMOO15229 486 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 LYPLA1O75608 230 aaPredicted RBP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 B3GALNT1O75752 331 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 FYNP06241 537 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 YWHAGP61981 247 aaKnown RBP eCLIP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 GABPAQ06546 454 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 FLOT2Q14254 428 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 TIGD2Q4W5G0 525 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 EGFLAMQ63HQ2 1017 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 MBLAC2Q68D91 279 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 TWF2Q6IBS0 349 aaKnown RBP10.86□□□□□ -0.67
ABCF1-205ENST00000475993 MAMSTRQ6ZN01 415 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
ABCF1-205ENST00000475993 PPM1NQ8N819 430 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms